RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CALML4Q96GE6 196 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 ZFP42Q96MM3 310 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 PNMA5Q96PV4 448 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 USP28Q96RU2 1077 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 CCDC113Q9H0I3 377 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 PDZD7Q9H5P4 517 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 C17orf75Q9HAS0 396 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 CLEC1BQ9P126 229 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 PRKAG3Q9UGI9 489 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 BARX2Q9UMQ3 279 aaPredicted RBP16.89■□□□□ 0.29
NUP50-219ENST00000497960 ZDHHC9Q9Y397 364 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 ATP6V1DQ9Y5K8 247 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 C2orf71A6NGG8 1288 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 MBTPS2O43462 519 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 B4GALT3O60512 393 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 GLP2RO95838 553 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 NPTX2P47972 431 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 SCNN1GP51170 649 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 COASYQ13057 564 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 GIT2Q14161 759 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 COLGALT2Q8IYK4 626 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 GJD3Q8N144 294 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 SYT2Q8N9I0 419 aaPredicted RBP16.88■□□□□ 0.29
NUP50-219ENST00000497960 RASSF8Q8NHQ8 419 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 MSLNLQ96KJ4 702 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 RPS6KC1Q96S38 1066 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 ZBP1Q9H171 429 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 KMT5AQ9NQR1 393 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 CLIC4Q9Y696 253 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 PHLPP2Q6ZVD8 1323 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 ZMYM2Q9UBW7 1377 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 XIRP2A4UGR9 3374 aa16.88■□□□□ 0.29
NUP50-219ENST00000497960 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.87■□□□□ 0.29
NUP50-219ENST00000497960 TTLL13PA6NNM8 815 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 NRP1O14786 923 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 PLA2G4BP0C869 781 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 CTSAP10619 480 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 LONP1P36776 959 aaKnown RBP16.87■□□□□ 0.29
NUP50-219ENST00000497960 OR1G1P47890 313 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 STK38Q15208 465 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 SMAD2Q15796 467 aaKnown RBP16.87■□□□□ 0.29
NUP50-219ENST00000497960 DCAF4L1Q3SXM0 396 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 TMEM119Q4V9L6 283 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 SMRP1Q8NCR6 262 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 BCL7CQ8WUZ0 217 aaPredicted RBP16.87■□□□□ 0.29
NUP50-219ENST00000497960 MIOSQ9NXC5 875 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 KCND2Q9NZV8 630 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 KLK14Q9P0G3 267 aa16.87■□□□□ 0.29
NUP50-219ENST00000497960 PRG3Q9Y2Y8 225 aaPredicted RBP16.87■□□□□ 0.29
NUP50-219ENST00000497960 SPTBN5Q9NRC6 3674 aaKnown RBP16.86■□□□□ 0.29
NUP50-219ENST00000497960 BDP1A6H8Y1 2624 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 RBM10P98175 930 aaKnown RBP16.86■□□□□ 0.29
NUP50-219ENST00000497960 DNM1Q05193 864 aaKnown RBP16.86■□□□□ 0.29
NUP50-219ENST00000497960 DSC1Q08554 894 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 GRIK3Q13003 919 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 ATF7IP2Q5U623 682 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 LLGL2Q6P1M3 1020 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 TMEM184AQ6ZMB5 413 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 ADHFE1Q8IWW8 467 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 DAW1Q8N136 415 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 VN1R2Q8NFZ6 395 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 CASP10Q92851 521 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 POP1Q99575 1024 aaKnown RBP16.86■□□□□ 0.29
NUP50-219ENST00000497960 COLEC11Q9BWP8 271 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 TMEM134Q9H6X4 195 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 CHMP5Q9NZZ3 219 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 USP20Q9Y2K6 914 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 IRAK3Q9Y616 596 aa16.86■□□□□ 0.29
NUP50-219ENST00000497960 SFI1A8K8P3 1242 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 CLASP2O75122 1294 aaKnown RBP16.85■□□□□ 0.29
NUP50-219ENST00000497960 NASPP49321 788 aaPredicted RBP16.85■□□□□ 0.29
NUP50-219ENST00000497960 SMTNP53814 917 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 SLC12A3P55017 1021 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 KRT85P78386 507 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 ZP2Q05996 745 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 RAD51AP2Q09MP3 1159 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 MAPK7Q13164 816 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 KCNC3Q14003 757 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 NT5DC1Q5TFE4 455 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 EEF1DP3Q658K8 133 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 ATL3Q6DD88 541 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 ANKRD54Q6NXT1 300 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 GSTCDQ8NEC7 633 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 AUTS2Q8WXX7 1259 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 MRPL4Q9BYD3 311 aaKnown RBP16.85■□□□□ 0.29
NUP50-219ENST00000497960 CD320Q9NPF0 282 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 SNTG2Q9NY99 539 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 ARHGAP28Q9P2N2 729 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 TNFSF13BQ9Y275 285 aa16.85■□□□□ 0.29
NUP50-219ENST00000497960 SLC16A4O15374 487 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 RECQL4O94761 1208 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 EDN1P05305 212 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 PLS3P13797 630 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 HOXB8P17481 243 aaPredicted RBP16.84■□□□□ 0.29
NUP50-219ENST00000497960 PTPAQ15257 358 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 SPIRE2Q8WWL2 714 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 VN1R3Q9BXE9 311 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 EMILIN2Q9BXX0 1053 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms