RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 RESP18Q5W5W9 173 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 SLC27A1Q6PCB7 646 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 PDILTQ8N807 584 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 SMG8Q8ND04 991 aaKnown RBP12.38□□□□□ -0.43
ERCC8-208ENST00000497892 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 GDPD5Q8WTR4 605 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 KCNN1Q92952 543 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 LPPQ93052 612 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 PGBD4Q96DM1 585 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 CASD1Q96PB1 797 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 EIF2AQ9BY44 585 aaKnown RBP12.38□□□□□ -0.43
ERCC8-208ENST00000497892 PDZD7Q9H5P4 517 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 TMEM134Q9H6X4 195 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 LARSQ9P2J5 1176 aaKnown RBP12.38□□□□□ -0.43
ERCC8-208ENST00000497892 KCNG1Q9UIX4 513 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 RBM19Q9Y4C8 960 aaKnown RBP12.38□□□□□ -0.43
ERCC8-208ENST00000497892 IPPQ9Y573 584 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 PRRC2BQ5JSZ5 2229 aaKnown RBP12.38□□□□□ -0.43
ERCC8-208ENST00000497892 K7ERI5 159 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 RFXAPO00287 272 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 SLC16A4O15374 487 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 TBCAO75347 108 aaKnown RBP12.37□□□□□ -0.43
ERCC8-208ENST00000497892 FAM13AO94988 1023 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 LIG1P18858 919 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 POU3F3P20264 500 aaPredicted RBP12.37□□□□□ -0.43
ERCC8-208ENST00000497892 BMPR1AP36894 532 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 SMTNP53814 917 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 NCKAP1LP55160 1127 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 GLB1LQ6UWU2 654 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 AGMOQ6ZNB7 445 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 SV2BQ7L1I2 683 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 TAS1R3Q7RTX0 852 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 CDR2LQ86X02 465 aaPredicted RBP12.37□□□□□ -0.43
ERCC8-208ENST00000497892 TMEM161BQ8NDZ6 487 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 HELQQ8TDG4 1101 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 TATDN2Q93075 761 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 MRPL9Q9BYD2 267 aaKnown RBP12.37□□□□□ -0.43
ERCC8-208ENST00000497892 SCAND2PQ9GZW5 306 aaPredicted RBP12.37□□□□□ -0.43
ERCC8-208ENST00000497892 CUEDC2Q9H467 287 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 NXF3Q9H4D5 531 aaKnown RBP12.37□□□□□ -0.43
ERCC8-208ENST00000497892 PARVGQ9HBI0 331 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 PLXNA4Q9HCM2 1894 aa12.37□□□□□ -0.43
ERCC8-208ENST00000497892 ZMYM2Q9UBW7 1377 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 MYMKA6NI61 221 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 H0YCG3 227 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 H3BNC9 293 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 N4BP3O15049 544 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 NPTXRO95502 500 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 RB1P06400 928 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 MAPTP10636 758 aaKnown RBP12.36□□□□□ -0.43
ERCC8-208ENST00000497892 SCP2P22307 547 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 ANP32AP39687 249 aaKnown RBP12.36□□□□□ -0.43
ERCC8-208ENST00000497892 TMEM132AQ24JP5 1023 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 LONRF3Q496Y0 759 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 NT5DC1Q5TFE4 455 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 LRRC55Q6ZSA7 311 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 HACE1Q8IYU2 909 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 P2RX5Q93086 422 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 C11orf84Q9BUA3 381 aaPredicted RBP12.36□□□□□ -0.43
ERCC8-208ENST00000497892 PANK2Q9BZ23 570 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 TRIM6Q9C030 488 aaPredicted RBP12.36□□□□□ -0.43
ERCC8-208ENST00000497892 TNMDQ9H2S6 317 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 CWH43Q9H720 699 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 RSAD1Q9HA92 442 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 TYW1Q9NV66 732 aaKnown RBP12.36□□□□□ -0.43
ERCC8-208ENST00000497892 FAM13BQ9NYF5 915 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 USP20Q9Y2K6 914 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 HES2Q9Y543 173 aa12.36□□□□□ -0.43
ERCC8-208ENST00000497892 TDRD15B5MCY1 1934 aaKnown RBP12.36□□□□□ -0.43
ERCC8-208ENST00000497892 INPPL1O15357 1258 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 TRAK2O60296 914 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 OFD1O75665 1012 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 ITGA4P13612 1032 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 LAG3P18627 525 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 GPM6BQ13491 265 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 ATF7IP2Q5U623 682 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 EEF1DP3Q658K8 133 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 ADALQ6DHV7 355 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 DYMQ7RTS9 669 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 HAUS6Q7Z4H7 955 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 MYCT1Q8N699 235 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 IQUBQ8NA54 791 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 MAFAQ8NHW3 353 aaPredicted RBP12.35□□□□□ -0.43
ERCC8-208ENST00000497892 DHX58Q96C10 678 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 DNAJC19Q96DA6 116 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 FIZ1Q96SL8 496 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 ADPGKQ9BRR6 497 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 MRPL4Q9BYD3 311 aaKnown RBP12.35□□□□□ -0.43
ERCC8-208ENST00000497892 MAGEF1Q9HAY2 307 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 UBN1Q9NPG3 1134 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 AAASQ9NRG9 546 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 TBC1D13Q9NVG8 400 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 KBTBD4Q9NVX7 518 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 LMCD1Q9NZU5 365 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 TNFSF13BQ9Y275 285 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 MTCH2Q9Y6C9 303 aa12.35□□□□□ -0.43
ERCC8-208ENST00000497892 REV3LO60673 3130 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms