RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SLC6A20Q9NP91 592 aa2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 DCP1AQ9NPI6 582 aaPredicted RBP2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 DMRT3Q9NQL9 472 aa2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 PRDM5Q9NQX1 630 aaPredicted RBP2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 KCNH7Q9NS40 1196 aa2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 HSPBP1Q9NZL4 362 aa2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 FNIP2Q9P278 1114 aa2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 SERPINB13Q9UIV8 391 aa2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 FBXL7Q9UJT9 491 aa2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 GPR52Q9Y2T5 361 aa2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 NOC2LQ9Y3T9 749 aaKnown RBP2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 NUMBLQ9Y6R0 609 aa2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 MORC2Q9Y6X9 1032 aaPredicted RBP2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 TAF1LQ8IZX4 1826 aa2.98□□□□□ -1.93
CKS1BP2-201ENST00000497342 DMXL1Q9Y485 3027 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 IFT172Q9UG01 1749 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 TMEM82A0PJX8 343 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 PRR33A8MZF0 331 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 DYNC1LI2O43237 492 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 XPOTO43592 962 aaKnown RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 TIMM44O43615 452 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 MYO1BO43795 1136 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 RNGTTO60942 597 aaKnown RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 NDUFS2O75306 463 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 KRT38O76015 456 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 SRGAP2CP0DJJ0 459 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 IL2RBP14784 551 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 FOSL2P15408 326 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 SLC9A1P19634 815 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 PDE6BP35913 854 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 SLC6A11P48066 632 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 SCAND1P57086 179 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 MRPS5P82675 430 aaKnown RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 SPIRE1Q08AE8 756 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 EFR3AQ14156 821 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 PDCD2Q16342 344 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 LONRF1Q17RB8 773 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 CCDC178Q5BJE1 867 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 CATSPEREQ5SY80 951 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 GJC2Q5T442 439 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 IZUMO3Q5VZ72 239 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 MBNL2Q5VZF2 373 aaKnown RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 C1orf228Q6PIY5 440 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 USP50Q70EL3 339 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 GPC2Q8N158 579 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 CISD2Q8N5K1 135 aaKnown RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 C12orf50Q8NA57 414 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 TMEM52Q8NDY8 209 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 TTLL11Q8NHH1 800 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 GIMAP7Q8NHV1 300 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 PLEKHO2Q8TD55 490 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 POF1BQ8WVV4 589 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 ANKS1AQ92625 1134 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 FOXRED1Q96CU9 486 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 MPP4Q96JB8 637 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 MYRFLQ96LU7 910 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 MTA3Q9BTC8 594 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 GLIS2Q9BZE0 524 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 ASCC2Q9H1I8 757 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 TRIT1Q9H3H1 467 aaKnown RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 R3HDMLQ9H3Y0 253 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 EPB41L1Q9H4G0 881 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 AS3MTQ9HBK9 375 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 STARD7Q9NQZ5 370 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 PPARGC1AQ9UBK2 798 aaKnown RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 ZC3H7BQ9UGR2 993 aaKnown RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 POLHQ9Y253 713 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 TMEM98Q9Y2Y6 226 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 PCDHA11Q9Y5I1 949 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 LRRFIP2Q9Y608 721 aaKnown RBP2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 COL15A1P39059 1388 aa2.97□□□□□ -1.93
CKS1BP2-201ENST00000497342 FRYQ5TBA9 3013 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 HECTD1Q9ULT8 2610 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 ZZEF1O43149 2961 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 CAPN8A6NHC0 703 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 NPHP1O15259 732 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 SLC26A4O43511 780 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 NBNO60934 754 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 DTNBO60941 627 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 TADA3O75528 432 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 FGF18O76093 207 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 C4BPAP04003 597 aaKnown RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 LDHCP07864 332 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PFKMP08237 780 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 MYF5P13349 255 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 EPS15P42566 896 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 GPR15P49685 360 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 DNM2P50570 870 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 KIF11P52732 1056 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PCBP3P57721 371 aaKnown RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 TNFAIP2Q03169 654 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 DDR1Q08345 913 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PUM3Q15397 648 aaKnown RBP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 SEC23AQ15436 765 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 ST3GAL2Q16842 350 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 PGS1Q32NB8 556 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 TRAPPC3LQ5T215 181 aa2.96□□□□□ -1.94
CKS1BP2-201ENST00000497342 MROH9Q5TGP6 573 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms