RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 CCDC65Q8IXS2 484 aa13.88□□□□□ -0.19
VEGFA-215ENST00000497139 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
VEGFA-215ENST00000497139 LENG1Q96BZ8 264 aaPredicted RBP13.88□□□□□ -0.19
VEGFA-215ENST00000497139 MLXIPLQ9NP71 852 aa13.88□□□□□ -0.19
VEGFA-215ENST00000497139 BAZ2AQ9UIF9 1905 aaKnown RBP13.88□□□□□ -0.19
VEGFA-215ENST00000497139 COPB2P35606 906 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 SULT2A1Q06520 285 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 PDK4Q16654 411 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 TTC27Q6P3X3 843 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 RHBDF2Q6PJF5 856 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 MIGA2Q7L4E1 593 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 HEATR3Q7Z4Q2 680 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 CCDC125Q86Z20 511 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 ALG3Q92685 438 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 CADM1Q9BY67 442 aaKnown RBP13.87□□□□□ -0.19
VEGFA-215ENST00000497139 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 OSGEPQ9NPF4 335 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 SENP1Q9P0U3 644 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 RTCBQ9Y3I0 505 aaKnown RBP13.87□□□□□ -0.19
VEGFA-215ENST00000497139 ZNF335Q9H4Z2 1342 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-215ENST00000497139 F8W8V4 182 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 TBX10O75333 385 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 ATP6V1G1O75348 118 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 ACSL3O95573 720 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 ECEL1O95672 775 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 ACTN1P12814 892 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 SLC9A1P19634 815 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 EPHA7Q15375 998 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 WDR72Q3MJ13 1102 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 TAF1BQ53T94 588 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-215ENST00000497139 ACSBG2Q5FVE4 666 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 FAM47EQ6ZV65 393 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 ADAT2Q7Z6V5 191 aaKnown RBP13.87□□□□□ -0.19
VEGFA-215ENST00000497139 CCDC25Q86WR0 208 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 CCDC105Q8IYK2 499 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 CYLDQ9NQC7 956 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 AAASQ9NRG9 546 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 SMG5Q9UPR3 1016 aaKnown RBP13.87□□□□□ -0.19
VEGFA-215ENST00000497139 FRMPD4Q14CM0 1322 aa13.87□□□□□ -0.19
VEGFA-215ENST00000497139 BAZ2BQ9UIF8 2168 aaKnown RBP13.86□□□□□ -0.19
VEGFA-215ENST00000497139 CBX6O95503 412 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 DSG1Q02413 1049 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 CTC1Q2NKJ3 1217 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 FYB2Q5VWT5 728 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 KLC3Q6P597 504 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 CLNKQ7Z7G1 428 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 RELL1Q8IUW5 271 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 RNF168Q8IYW5 571 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-215ENST00000497139 GLIS3Q8NEA6 775 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 LNX1Q8TBB1 728 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-215ENST00000497139 NAT14Q8WUY8 206 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 PPP2R3CQ969Q6 453 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 MIPEPQ99797 713 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 STK32BQ9NY57 414 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 PCDHA2Q9Y5H9 948 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 CICQ96RK0 1608 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-215ENST00000497139 CACNA1SQ13698 1873 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 ANKRD62A6NC57 917 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 IRS4O14654 1257 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-215ENST00000497139 PFDN1O60925 122 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 KRT36O76013 467 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 CYP1A1P04798 512 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-215ENST00000497139 MAN1A1P33908 653 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 WDR4P57081 412 aaKnown RBP13.86□□□□□ -0.19
VEGFA-215ENST00000497139 RTP1P59025 263 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 USP46P62068 366 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 ZNF211Q13398 564 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-215ENST00000497139 CALCRLQ16602 461 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 ADGRA1Q86SQ6 560 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 NLRP10Q86W26 655 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 ZSWIM1Q9BR11 485 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 SIX2Q9NPC8 291 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 KRT82Q9NSB4 513 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 EURLQ9NYK6 297 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 ABCF2Q9UG63 623 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 ZNF232Q9UNY5 417 aa13.86□□□□□ -0.19
VEGFA-215ENST00000497139 GSC2O15499 205 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 XRCC5P13010 732 aaKnown RBP13.85□□□□□ -0.19
VEGFA-215ENST00000497139 ALDH1B1P30837 517 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 INHBCP55103 352 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 Q4G0T1 1027 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 RFWD3Q6PCD5 774 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 DSTYKQ6XUX3 929 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 SRRM1Q8IYB3 904 aaKnown RBP13.85□□□□□ -0.19
VEGFA-215ENST00000497139 ALDH16A1Q8IZ83 802 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 OLIG1Q8TAK6 271 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 PIP4K2CQ8TBX8 421 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 DENND1AQ8TEH3 1009 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 CATSPER2Q96P56 530 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 WNT8AQ9H1J5 351 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 LRRC19Q9H756 370 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 PTTG2Q9NZH5 202 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 NAALADL1Q9UQQ1 740 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 TRAF3IP3Q9Y228 551 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 NHSL1Q5SYE7 1610 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 ITGA2BP08514 1039 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 ABHD2P08910 425 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 RPL13P26373 211 aaKnown RBP13.85□□□□□ -0.19
VEGFA-215ENST00000497139 CRABP2P29373 138 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms