RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 SLU7O95391 586 aaKnown RBP9.04□□□□□ -0.96
USP54-215ENST00000497106 TFAMQ00059 246 aaKnown RBP9.04□□□□□ -0.96
USP54-215ENST00000497106 CYP24A1Q07973 514 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 SYT10Q6XYQ8 523 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 LRRC71Q8N4P6 559 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 NAP1L3Q99457 506 aaPredicted RBP9.04□□□□□ -0.96
USP54-215ENST00000497106 AKAP3O75969 853 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 HMGCRP04035 888 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 EIF4A3P38919 411 aaKnown RBP9.04□□□□□ -0.96
USP54-215ENST00000497106 CRHR2Q13324 411 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 KLHDC7AQ5VTJ3 777 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 NFRKBQ6P4R8 1299 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 U2AF1L4Q8WU68 220 aaKnown RBP9.04□□□□□ -0.96
USP54-215ENST00000497106 POLD4Q9HCU8 107 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 ARHGAP28Q9P2N2 729 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 PCDHA2Q9Y5H9 948 aa9.04□□□□□ -0.96
USP54-215ENST00000497106 IGKV6D-21A0A0A0MT36 114 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 EDIL3O43854 480 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 UCHL3P15374 230 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 POLR2BP30876 1174 aaKnown RBP9.03□□□□□ -0.96
USP54-215ENST00000497106 ARHGAP1Q07960 439 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 BMS1Q14692 1282 aaKnown RBP9.03□□□□□ -0.96
USP54-215ENST00000497106 KIAA0753Q2KHM9 967 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 ZNF667Q5HYK9 610 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 WDR49Q8IV35 697 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 THNSL1Q8IYQ7 743 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 SH2D3AQ9BRG2 576 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 GOLGA6L10A0A0M3HER8 536 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 SMIM35A0A1B0GVV1 85 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 CTAGE15A4D2H0 777 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 AP5Z1O43299 807 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 CTAGE8P0CG41 777 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 PSMD6Q15008 389 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 C17orf99Q6UX52 265 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 CTAGE6Q86UF2 777 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 ZNF677Q86XU0 584 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 CTAGE4Q8IX94 777 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 ASAP3Q8TDY4 903 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 ZNF560Q96MR9 790 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 GLT1D1Q96MS3 346 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 TARS2Q9BW92 718 aaKnown RBP9.03□□□□□ -0.96
USP54-215ENST00000497106 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP54-215ENST00000497106 PCDHB4Q9Y5E5 795 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 UQCRHLA0A096LP55 91 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 SOWAHDA6NJG2 315 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 TMCO5BA8MYB1 307 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 ZBTB39O15060 712 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 UQCRHP07919 91 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 MAP2K1Q02750 393 aaPredicted RBP9.03□□□□□ -0.96
USP54-215ENST00000497106 MTHFD1LQ6UB35 978 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 ZC3H3Q8IXZ2 948 aaKnown RBP9.03□□□□□ -0.96
USP54-215ENST00000497106 SLAIN1Q8ND83 568 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 KCND1Q9NSA2 647 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 RAB20Q9NX57 234 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 ZNF862O60290 1169 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 ZNF286BP0CG31 522 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 TRIM49P0CI25 452 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 TRIM49CP0CI26 452 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 CLCN3P51790 818 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 WHAMMP3Q1A5X7 153 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 SGSM1Q2NKQ1 1148 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 CYP4F22Q6NT55 531 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 CCDC62Q6P9F0 684 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 RNF10Q8N5U6 811 aaKnown RBP9.03□□□□□ -0.96
USP54-215ENST00000497106 PGBD4Q96DM1 585 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 XPNPEP3Q9NQH7 507 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 PARP2Q9UGN5 583 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 PLAGL2Q9UPG8 496 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 TNFSF13BQ9Y275 285 aa9.03□□□□□ -0.96
USP54-215ENST00000497106 PIGRP01833 764 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 ZNF699Q32M78 642 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 MORN1Q5T089 497 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 UBL4BQ8N7F7 174 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 COPS5Q92905 334 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 PDGFCQ9NRA1 345 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 PCDHA13Q9Y5I0 950 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 CD4P01730 458 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 CYP2C19P33261 490 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 PBX1P40424 430 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 CASP5P51878 434 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 NLRP11P59045 1033 aaKnown RBP9.02□□□□□ -0.97
USP54-215ENST00000497106 PTENP60484 403 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 LACTBP83111 547 aaPredicted RBP9.02□□□□□ -0.97
USP54-215ENST00000497106 MOGSQ13724 837 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 DRAP1Q14919 205 aaPredicted RBP9.02□□□□□ -0.97
USP54-215ENST00000497106 HSDL1Q3SXM5 330 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 MAP9Q49MG5 647 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 CST9Q5W186 159 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 BRSK2Q8IWQ3 736 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 RHOT2Q8IXI1 618 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 SLC35C1Q96A29 364 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 CBWD1Q9BRT8 395 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 NFKBIZQ9BYH8 718 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 SLC38A7Q9NVC3 462 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 ADGRG1Q9Y653 693 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 MACROD2A1Z1Q3 448 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 GPR182O15218 404 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 TGFB1I1O43294 461 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 RGS20O76081 388 aa9.02□□□□□ -0.97
USP54-215ENST00000497106 MYBL1P10243 752 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms