RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 TSPAN1O60635 241 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 OFD1O75665 1012 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 EYA4O95677 639 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 CXCL14O95715 111 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 ALDH2P05091 517 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 HOXB8P17481 243 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-220ENST00000496882 NCLP19338 710 aaKnown RBP8.68□□□□□ -1.02
SRRM1-220ENST00000496882 RPA1P27694 616 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 ARL2P36404 184 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 CCT6AP40227 531 aaKnown RBP8.68□□□□□ -1.02
SRRM1-220ENST00000496882 MCM2P49736 904 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 CAPSQ13938 189 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 PPP2R5AQ15172 486 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 CES5AQ6NT32 575 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 ELMSAN1Q6PJG2 1045 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 MAEAQ7L5Y9 396 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 MRPL10Q7Z7H8 261 aaKnown RBP8.68□□□□□ -1.02
SRRM1-220ENST00000496882 CATSPER3Q86XQ3 398 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 VPS52Q8N1B4 723 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 IGSF21Q96ID5 467 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 IFT74Q96LB3 600 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 RPS6KC1Q96S38 1066 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 ADPGKQ9BRR6 497 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 TMEM175Q9BSA9 504 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 APOL6Q9BWW8 343 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 NFKBIZQ9BYH8 718 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 CSRNP2Q9H175 543 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 NRDE2Q9H7Z3 1164 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 MINDY3Q9H8M7 445 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 XPNPEP1Q9NQW7 623 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 PRMT7Q9NVM4 692 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-220ENST00000496882 LRWD1Q9UFC0 647 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 RABGEF1Q9UJ41 708 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 FAN1Q9Y2M0 1017 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 USP15Q9Y4E8 981 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-220ENST00000496882 PLXNA4Q9HCM2 1894 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 SPTBN5Q9NRC6 3674 aaKnown RBP8.67□□□□□ -1.02
SRRM1-220ENST00000496882 LAD1O00515 517 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 WNT7AO00755 349 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 GPR37L1O60883 481 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 MED24O75448 989 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 GLP2RO95838 553 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 POMCP01189 267 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 GALTP07902 379 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 GLRA2P23416 452 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 HOXA11P31270 313 aaPredicted RBP8.67□□□□□ -1.02
SRRM1-220ENST00000496882 MBTD1Q05BQ5 628 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 KRT79Q5XKE5 535 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 ANKRD54Q6NXT1 300 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 SLC27A1Q6PCB7 646 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 POTEGQ6S5H5 508 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 AGMOQ6ZNB7 445 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 APBB1IPQ7Z5R6 666 aaPredicted RBP8.67□□□□□ -1.02
SRRM1-220ENST00000496882 DDX53Q86TM3 631 aaKnown RBP8.67□□□□□ -1.02
SRRM1-220ENST00000496882 PPFIBP1Q86W92 1011 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 MRPL43Q8N983 215 aaKnown RBP8.67□□□□□ -1.02
SRRM1-220ENST00000496882 DEPTORQ8TB45 409 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 ASAP3Q8TDY4 903 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 LRRN4Q8WUT4 740 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 TTC28Q96AY4 2481 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 CPB2Q96IY4 423 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 PRIMPOLQ96LW4 560 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 LRFN3Q9BTN0 628 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 PHF7Q9BWX1 381 aaPredicted RBP8.67□□□□□ -1.02
SRRM1-220ENST00000496882 EMILIN2Q9BXX0 1053 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 CD320Q9NPF0 282 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 DZANK1Q9NVP4 752 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 CLEC1BQ9P126 229 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 PARP2Q9UGN5 583 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 SSX2IPQ9Y2D8 614 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 GIT1Q9Y2X7 761 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 IPPQ9Y573 584 aa8.67□□□□□ -1.02
SRRM1-220ENST00000496882 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.67□□□□□ -1.02
SRRM1-220ENST00000496882 A0A087WWV3 80 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 FAM86C2PA6NEL3 165 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 C2orf71A6NGG8 1288 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 MEIS3P2A8K0S8 358 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 HIDE1A8MVS5 230 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 CFAP99D6REC4 459 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 N4BP3O15049 544 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 NPTXRO95502 500 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 URODP06132 367 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 SPATA31C1P0DKV0 1188 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 CTSAP10619 480 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 ARF4P18085 180 aaPredicted RBP8.66□□□□□ -1.02
SRRM1-220ENST00000496882 LIG1P18858 919 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 RFX1P22670 979 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 U2AF2P26368 475 aaKnown RBP eCLIP8.66□□□□□ -1.022e-10■□□□□ 10
SRRM1-220ENST00000496882 MLH1P40692 756 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 OR1G1P47890 313 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 SLC11A1P49279 550 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 ITIH3Q06033 890 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 VAC14Q08AM6 782 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 PRPF4BQ13523 1007 aaKnown RBP8.66□□□□□ -1.02
SRRM1-220ENST00000496882 PDIA5Q14554 519 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 MAPK6Q16659 721 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 RILPL1Q5EBL4 403 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 UBXN11Q5T124 520 aa8.66□□□□□ -1.02
SRRM1-220ENST00000496882 TMEM184AQ6ZMB5 413 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms