RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 IFT122Q9HBG6 1241 aa8.24□□□□□ -1.09
TARDBP-210ENST00000496840 GPRC5BQ9NZH0 403 aa8.24□□□□□ -1.09
TARDBP-210ENST00000496840 ING1Q9UK53 422 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-210ENST00000496840 PTGS2P35354 604 aa8.23□□□□□ -1.09
TARDBP-210ENST00000496840 GPR3P46089 330 aa8.23□□□□□ -1.09
TARDBP-210ENST00000496840 ERVK-21P61565 698 aa8.23□□□□□ -1.09
TARDBP-210ENST00000496840 DRICH1Q6PGQ1 229 aaPredicted RBP8.23□□□□□ -1.09
TARDBP-210ENST00000496840 GPR156Q8NFN8 814 aa8.23□□□□□ -1.09
TARDBP-210ENST00000496840 SLC25A43Q8WUT9 341 aaPredicted RBP8.23□□□□□ -1.09
TARDBP-210ENST00000496840 SLC2A4RGQ9NR83 387 aa8.23□□□□□ -1.09
TARDBP-210ENST00000496840 REXO2Q9Y3B8 237 aaKnown RBP8.23□□□□□ -1.09
TARDBP-210ENST00000496840 ZMYM3Q14202 1370 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 PHLDB1Q86UU1 1377 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 PRR5-ARHGAP8B1AHC4 643 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 FAM20BO75063 409 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 RECQL4O94761 1208 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 FAM180AQ6UWF9 173 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 ZNF276Q8N554 614 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 ATL2Q8NHH9 583 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 RIN2Q8WYP3 895 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-210ENST00000496840 LENG9Q96B70 501 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 NDC1Q9BTX1 674 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 FAM126AQ9BYI3 521 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-210ENST00000496840 TRIM8Q9BZR9 551 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 GREM2Q9H772 168 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 SPC25Q9HBM1 224 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 MCM8Q9UJA3 840 aa8.22□□□□□ -1.09
TARDBP-210ENST00000496840 PPFIA4O75335 1185 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 FLT3LGP49771 235 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 TOR2AQ5JU69 321 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 RHOUQ7L0Q8 258 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 XYLT1Q86Y38 959 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 MDM1Q8TC05 714 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 HAS1Q92839 578 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 CLIP3Q96DZ5 547 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 ACE2Q9BYF1 805 aaPredicted RBP8.21□□□□□ -1.1
TARDBP-210ENST00000496840 KCNH6Q9H252 994 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 BCO1Q9HAY6 547 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 CCM2LQ9NUG4 571 aaPredicted RBP8.21□□□□□ -1.1
TARDBP-210ENST00000496840 SORCS3Q9UPU3 1222 aa8.21□□□□□ -1.1
TARDBP-210ENST00000496840 AKR1B10O60218 316 aa8.2□□□□□ -1.1
TARDBP-210ENST00000496840 MTNR1BP49286 362 aa8.2□□□□□ -1.1
TARDBP-210ENST00000496840 SLC5A3P53794 718 aa8.2□□□□□ -1.1
TARDBP-210ENST00000496840 TGFB2P61812 414 aa8.2□□□□□ -1.1
TARDBP-210ENST00000496840 DPTQ07507 201 aa8.2□□□□□ -1.1
TARDBP-210ENST00000496840 MUM1L1Q5H9M0 696 aa8.2□□□□□ -1.1
TARDBP-210ENST00000496840 PRAMEF14Q5SWL7 426 aa8.2□□□□□ -1.1
TARDBP-210ENST00000496840 OR7D4Q8NG98 312 aa8.2□□□□□ -1.1
TARDBP-210ENST00000496840 NEU4Q8WWR8 484 aaPredicted RBP8.2□□□□□ -1.1
TARDBP-210ENST00000496840 LARP4BQ92615 738 aaKnown RBP8.2□□□□□ -1.1
TARDBP-210ENST00000496840 DCLRE1CQ96SD1 692 aaKnown RBP8.2□□□□□ -1.1
TARDBP-210ENST00000496840 NRDE2Q9H7Z3 1164 aa8.2□□□□□ -1.1
TARDBP-210ENST00000496840 RBM12Q9NTZ6 932 aaKnown RBP8.2□□□□□ -1.1
TARDBP-210ENST00000496840 TBKBP1A7MCY6 615 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 MGAT1P26572 445 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 CCT2P78371 535 aaKnown RBP8.19□□□□□ -1.1
TARDBP-210ENST00000496840 SRSF2Q01130 221 aaKnown RBP8.19□□□□□ -1.1
TARDBP-210ENST00000496840 CSRP2Q16527 193 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 BMT2Q1RMZ1 405 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 FAM47AQ5JRC9 791 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 NECAB2Q7Z6G3 386 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 MRGPREQ86SM8 312 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 ULK2Q8IYT8 1036 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 CPT1CQ8TCG5 803 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 COG1Q8WTW3 980 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 MENTQ9BUN1 341 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 SLC46A2Q9BY10 475 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 DNAJC28Q9NX36 388 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 EIF2B4Q9UI10 523 aaKnown RBP8.19□□□□□ -1.1
TARDBP-210ENST00000496840 FZD1Q9UP38 647 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 WASHC2AQ641Q2 1341 aa8.19□□□□□ -1.1
TARDBP-210ENST00000496840 DIRC3C9JPN6 131 aa8.18□□□□□ -1.1
TARDBP-210ENST00000496840 PJA2O43164 708 aa8.18□□□□□ -1.1
TARDBP-210ENST00000496840 SCAF4O95104 1147 aaKnown RBP8.18□□□□□ -1.1
TARDBP-210ENST00000496840 NR4A1P22736 598 aa8.18□□□□□ -1.1
TARDBP-210ENST00000496840 CANXP27824 592 aaKnown RBP8.18□□□□□ -1.1
TARDBP-210ENST00000496840 ECHS1P30084 290 aa8.18□□□□□ -1.1
TARDBP-210ENST00000496840 PURAQ00577 322 aaKnown RBP8.18□□□□□ -1.1
TARDBP-210ENST00000496840 MALLQ13021 153 aa8.18□□□□□ -1.1
TARDBP-210ENST00000496840 MFSD14BQ5SR56 506 aa8.18□□□□□ -1.1
TARDBP-210ENST00000496840 MBNL2Q5VZF2 373 aaKnown RBP8.18□□□□□ -1.1
TARDBP-210ENST00000496840 ANKS6Q68DC2 871 aa8.18□□□□□ -1.1
TARDBP-210ENST00000496840 Q6ZVL8 140 aa8.18□□□□□ -1.1
TARDBP-210ENST00000496840 ZNF572Q7Z3I7 529 aaPredicted RBP8.18□□□□□ -1.1
TARDBP-210ENST00000496840 TRMT2AQ8IZ69 625 aaKnown RBP8.18□□□□□ -1.1
TARDBP-210ENST00000496840 HOXB13Q92826 284 aaPredicted RBP8.18□□□□□ -1.1
TARDBP-210ENST00000496840 PRRX2Q99811 253 aa8.18□□□□□ -1.1
TARDBP-210ENST00000496840 CADPSQ9ULU8 1353 aa8.18□□□□□ -1.1
TARDBP-210ENST00000496840 AHRRA9YTQ3 701 aa8.17□□□□□ -1.1
TARDBP-210ENST00000496840 ADCY6O43306 1168 aa8.17□□□□□ -1.1
TARDBP-210ENST00000496840 RPS6KA4O75676 772 aa8.17□□□□□ -1.1
TARDBP-210ENST00000496840 ADSLP30566 484 aaPredicted RBP8.17□□□□□ -1.1
TARDBP-210ENST00000496840 APOBEC3AP31941 199 aaPredicted RBP8.17□□□□□ -1.1
TARDBP-210ENST00000496840 PPP3CAQ08209 521 aa8.17□□□□□ -1.1
TARDBP-210ENST00000496840 EFCAB12Q6NXP0 572 aa8.17□□□□□ -1.1
TARDBP-210ENST00000496840 DDX42Q86XP3 938 aaKnown RBP eCLIP8.17□□□□□ -1.1
TARDBP-210ENST00000496840 SYNE4Q8N205 404 aa8.17□□□□□ -1.1
TARDBP-210ENST00000496840 FAM193BQ96PV7 902 aaPredicted RBP8.17□□□□□ -1.1
TARDBP-210ENST00000496840 PUS7LQ9H0K6 701 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms