RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TMEM139Q8IV31 216 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 CCDC65Q8IXS2 484 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 SCFD1Q8WVM8 642 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 MPP4Q96JB8 637 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 SENP7Q9BQF6 1050 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 TUBGCP2Q9BSJ2 902 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 TSEN34Q9BSV6 310 aaKnown RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 MMADHCQ9H3L0 296 aaPredicted RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 SPTLC3Q9NUV7 552 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 HOXC10Q9NYD6 342 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 A0A1W2PRU2 124 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 TTLL8A6PVC2 850 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 FANCGO15287 622 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 DHX15O43143 795 aaKnown RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 PPP1R12BO60237 982 aaPredicted RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 ZBED4O75132 1171 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 ZNF189O75820 626 aaPredicted RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 CYP3A4P08684 503 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 MYBP10242 640 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 CCNE1P24864 410 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 NMT1P30419 496 aaKnown RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 EPHX2P34913 555 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 NPEPPSP55786 919 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 UGCGQ16739 394 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 TKFCQ3LXA3 575 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 FILIP1LQ4L180 1135 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 FAM26FQ5R3K3 315 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 ARHGEF16Q5VV41 709 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 CNNM4Q6P4Q7 775 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 CATSPERGQ6ZRH7 1159 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 PPM1EQ8WY54 764 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 CLIP3Q96DZ5 547 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 CNOT6LQ96LI5 555 aaKnown RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 FAM20AQ96MK3 541 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 MXRA8Q9BRK3 442 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 PDCD2LQ9BRP1 358 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 LXNQ9BS40 222 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 CUEDC2Q9H467 287 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 TXNRD2Q9NNW7 524 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 GPRC5CQ9NQ84 441 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 A1CFQ9NQ94 594 aaKnown RBP6.7□□□□□ -1.34
SSBP1-213ENST00000496622 BTBD7Q9P203 1132 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 TMCC3Q9ULS5 477 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 RABGAP1Q9Y3P9 1069 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 ASTN1O14525 1302 aa6.7□□□□□ -1.34
SSBP1-213ENST00000496622 TTC26A0AVF1 554 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 TISP43B9A030 160 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 CLIC2O15247 247 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 PLA2G6O60733 806 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 HIP1RO75146 1068 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 UPP2O95045 317 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 CCNE2O96020 404 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 PGK2P07205 417 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 HOXD13P35453 343 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 MNAT1P51948 309 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 USP14P54578 494 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 EHHADHQ08426 723 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 TBX2Q13207 712 aaPredicted RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 ORC2Q13416 577 aaPredicted RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 STIM1Q13586 685 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 TMEM63BQ5T3F8 832 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 HAUS3Q68CZ6 603 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 LMBRD2Q68DH5 695 aaPredicted RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 CENPPQ6IPU0 288 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 RINT1Q6NUQ1 792 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 CCAR2Q8N163 923 aaKnown RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 REPS2Q8NFH8 660 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 EZH1Q92800 747 aaPredicted RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 ZBTB10Q96DT7 871 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 CHP1Q99653 195 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 NT5C3AQ9H0P0 336 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 FAM207AQ9NSI2 230 aaPredicted RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 SEL1LQ9UBV2 794 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 BARX2Q9UMQ3 279 aaPredicted RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 USP20Q9Y2K6 914 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 PCDHA2Q9Y5H9 948 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 CSADQ9Y600 493 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 SPINT1O43278 529 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 CTIFO43310 598 aaKnown RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 ATP6V1G1O75348 118 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 FGFR1OPO95684 399 aaKnown RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 CYP2C8P10632 490 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 PBX1P40424 430 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 MTIF2P46199 727 aaKnown RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 GSDMDP57764 484 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 SP2Q02086 613 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 DEUP1Q05D60 604 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 TMEM62Q0P6H9 643 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 WASHC5Q12768 1159 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 PSME4Q14997 1843 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 MIIPQ5JXC2 388 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 PLA2G4FQ68DD2 849 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 MOXD1Q6UVY6 613 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 RAD9BQ6WBX8 426 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 SREK1Q8WXA9 508 aaKnown RBP6.69□□□□□ -1.34
SSBP1-213ENST00000496622 SLC5A5Q92911 643 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 CDCA5Q96FF9 252 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 AS3MTQ9HBK9 375 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 TRPV5Q9NQA5 729 aa6.69□□□□□ -1.34
SSBP1-213ENST00000496622 PXMP2Q9NR77 195 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms