RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SEPT1Q8WYJ6 367 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 SLC10A4Q96EP9 437 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 FNBP1Q96RU3 617 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 SELENOOQ9BVL4 669 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 STRA6Q9BX79 667 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 C2orf40Q9H1Z8 148 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 PCIF1Q9H4Z3 704 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 PRM3Q9NNZ6 103 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 ARFGAP3Q9NP61 516 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 PUF60Q9UHX1 559 aaKnown RBP7.5□□□□□ -1.21
USP39-219ENST00000496047 DNAJC12Q9UKB3 198 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 FZD1Q9UP38 647 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 SLC45A1Q9Y2W3 748 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 REXO2Q9Y3B8 237 aaKnown RBP7.5□□□□□ -1.21
USP39-219ENST00000496047 A0A0A6YYK5 440 aaPredicted RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 MOXD2PA6NHM9 499 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 LRRIQ4A6NIV6 560 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 ZNF233A6NK53 670 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 F8VZ95 297 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 LCE2BO14633 110 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 ZC3H11AO75152 810 aaKnown RBP eCLIP7.49□□□□□ -1.21
USP39-219ENST00000496047 NOL4O94818 638 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 CLSTN1O94985 981 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 ATG7O95352 703 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 GGPS1O95749 300 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 PLEKP08567 350 aaPredicted RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 H2AFZP0C0S5 128 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 CETPP11597 493 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 TNFAIP3P21580 790 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 UBA1P22314 1058 aaKnown RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 EDNRBP24530 442 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 NOP2P46087 812 aaKnown RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 NPTX2P47972 431 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 PDE6CP51160 858 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 STAT5BP51692 787 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 NPEPPSP55786 919 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 KCNA1Q09470 495 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 TFDP1Q14186 410 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 TTLL4Q14679 1199 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 SURF1Q15526 300 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 NAB2Q15742 525 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 ENOX2Q16206 610 aaKnown RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 SNRNP35Q16560 246 aaKnown RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 KIAA0753Q2KHM9 967 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 WDR44Q5JSH3 913 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 HGSNATQ68CP4 663 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 KRT39Q6A163 491 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 PPP1R2P3Q6NXS1 205 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 ALKBH5Q6P6C2 394 aaKnown RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 H2AFVQ71UI9 128 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 ANO5Q75V66 913 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 RSRC2Q7L4I2 434 aaKnown RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 TRMT1LQ7Z2T5 733 aaKnown RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 KRT222Q8N1A0 295 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 AFAP1L1Q8TED9 768 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 TSC1Q92574 1164 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 NT5C1BQ96P26 610 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 NTPCRQ9BSD7 190 aaKnown RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 IMPG2Q9BZV3 1241 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 TMEM8AQ9HCN3 771 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 C1orf112Q9NSG2 853 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 SEPT11Q9NVA2 429 aaKnown RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 SLC5A4Q9NY91 659 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 OGFRQ9NZT2 677 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 BTBD7Q9P203 1132 aa7.49□□□□□ -1.21
USP39-219ENST00000496047 MAFBQ9Y5Q3 323 aaPredicted RBP7.49□□□□□ -1.21
USP39-219ENST00000496047 GRID2IPA4D2P6 1211 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 K7ERI5 159 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 CES2O00748 559 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 HOXA2O43364 376 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 EXTL3O43909 919 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 FARP2O94887 1054 aaPredicted RBP7.48□□□□□ -1.21
USP39-219ENST00000496047 MOCS3O95396 460 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 ATP1A1P05023 1023 aaKnown RBP7.48□□□□□ -1.21
USP39-219ENST00000496047 SLC10A3P09131 477 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 TRIM49P0CI25 452 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 TRIM49CP0CI26 452 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 ACTN1P12814 892 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 H2AFXP16104 143 aaPredicted RBP7.48□□□□□ -1.21
USP39-219ENST00000496047 CNGA1P29973 690 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 GCLCP48506 637 aaPredicted RBP7.48□□□□□ -1.21
USP39-219ENST00000496047 GTF2A2P52657 109 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 EFNA5P52803 228 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 AP3M2P53677 418 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 JAM2P57087 298 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 ERVK-9P63128 1117 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 AMPD2Q01433 879 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 CNTN2Q02246 1040 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 ITIH3Q06033 890 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 MXD4Q14582 209 aaPredicted RBP7.48□□□□□ -1.21
USP39-219ENST00000496047 DRAP1Q14919 205 aaPredicted RBP7.48□□□□□ -1.21
USP39-219ENST00000496047 ARHGAP44Q17R89 818 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 ASTE1Q2TB18 679 aaPredicted RBP7.48□□□□□ -1.21
USP39-219ENST00000496047 CFAP221Q4G0U5 840 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 PPP2R2DQ66LE6 453 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 FBXO38Q6PIJ6 1188 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 KSR1Q8IVT5 923 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 RHOT2Q8IXI1 618 aa7.48□□□□□ -1.21
USP39-219ENST00000496047 DHX37Q8IY37 1157 aaKnown RBP7.48□□□□□ -1.21
USP39-219ENST00000496047 TMEM161BQ8NDZ6 487 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms