RNA–Protein interactions for RNA: ENST00000496027.5

CCDC13-209, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 386 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-209ENST00000496027 PDZD7Q9H5P4 517 aa14.65□□□□□ -0.06
CCDC13-209ENST00000496027 HCSTQ9UBK5 93 aa14.65□□□□□ -0.06
CCDC13-209ENST00000496027 CD207Q9UJ71 328 aa14.65□□□□□ -0.06
CCDC13-209ENST00000496027 BRWD1Q9NSI6 2320 aa14.65□□□□□ -0.06
CCDC13-209ENST00000496027 PRUNE2Q8WUY3 3088 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 C1RP00736 705 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 THP07101 528 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 LIG1P18858 919 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 AKAP5P24588 427 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 MLH1P40692 756 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 SLC11A1P49279 550 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 MAPK7Q13164 816 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 KYAT1Q16773 422 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 NT5DC1Q5TFE4 455 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 RRAGBQ5VZM2 374 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 ZPBP2Q6X784 338 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 CCDC73Q6ZRK6 1079 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 FAM178BQ8IXR5 827 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 KRI1Q8N9T8 703 aaKnown RBP14.64□□□□□ -0.07
CCDC13-209ENST00000496027 RAD54LQ92698 747 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 TCHPQ9BT92 498 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 EMILIN2Q9BXX0 1053 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 NXF3Q9H4D5 531 aaKnown RBP14.64□□□□□ -0.07
CCDC13-209ENST00000496027 POLD4Q9HCU8 107 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 TOPORSQ9NS56 1045 aaPredicted RBP14.64□□□□□ -0.07
CCDC13-209ENST00000496027 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 DNAJB4Q9UDY4 337 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 DPP7Q9UHL4 492 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 FBXO2Q9UK22 296 aaPredicted RBP14.64□□□□□ -0.07
CCDC13-209ENST00000496027 HES2Q9Y543 173 aa14.64□□□□□ -0.07
CCDC13-209ENST00000496027 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.64□□□□□ -0.07
CCDC13-209ENST00000496027 C2orf71A6NGG8 1288 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 SFI1A8K8P3 1242 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 H3BQ06 376 aaPredicted RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 PPP6R2O75170 966 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 KRT18P05783 430 aaKnown RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 MCF2P10911 925 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 MARCKSP29966 332 aaPredicted RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 PBX3P40426 434 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 OR1G1P47890 313 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 NASPP49321 788 aaPredicted RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 YARSP54577 528 aaKnown RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 TUSC3Q13454 348 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 SMAD4Q13485 552 aaKnown RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 SMAD2Q15796 467 aaKnown RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 ARSHQ5FYA8 562 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 PLPP4Q5VZY2 271 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 SV2BQ7L1I2 683 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 ADGRD2Q7Z7M1 963 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 GSTCDQ8NEC7 633 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 LARP4BQ92615 738 aaKnown RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 CASP10Q92851 521 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 MSLNLQ96KJ4 702 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 POP1Q99575 1024 aaKnown RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 CCDC94Q9BW85 323 aaPredicted RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 APOL6Q9BWW8 343 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 LRRC27Q9C0I9 530 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 ZBP1Q9H171 429 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 PARVGQ9HBI0 331 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 PTPRHQ9HD43 1115 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 MRPL17Q9NRX2 175 aaKnown RBP14.63□□□□□ -0.07
CCDC13-209ENST00000496027 MIOSQ9NXC5 875 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 SNTG2Q9NY99 539 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 CFAP45Q9UL16 551 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 A0A0C4DFX4 3053 aa14.63□□□□□ -0.07
CCDC13-209ENST00000496027 UNC80Q8N2C7 3258 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 EYSQ5T1H1 3165 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 PER2O15055 1255 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 SLC16A4O15374 487 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 MBTPS2O43462 519 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 TOM1L1O75674 476 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 FAM13AO94988 1023 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 BRD1O95696 1058 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 SOD2P04179 222 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 ZSCAN22P10073 491 aaPredicted RBP14.62□□□□□ -0.07
CCDC13-209ENST00000496027 PLCG1P19174 1290 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 GRM5P41594 1212 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 SCNN1GP51170 649 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 AFF1P51825 1210 aaKnown RBP14.62□□□□□ -0.07
CCDC13-209ENST00000496027 ZNF131P52739 623 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 CEBPZQ03701 1054 aaKnown RBP14.62□□□□□ -0.07
CCDC13-209ENST00000496027 KCNC3Q14003 757 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 KARSQ15046 597 aaKnown RBP14.62□□□□□ -0.07
CCDC13-209ENST00000496027 STK38Q15208 465 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 TPRNQ4KMQ1 711 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 ELMSAN1Q6PJG2 1045 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 HAUS6Q7Z4H7 955 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 GPBP1Q86WP2 473 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 CDR2LQ86X02 465 aaPredicted RBP14.62□□□□□ -0.07
CCDC13-209ENST00000496027 MYCT1Q8N699 235 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 TMEM161BQ8NDZ6 487 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 EPSTI1Q96J88 318 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 ZFP42Q96MM3 310 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 UROC1Q96N76 676 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 USP28Q96RU2 1077 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 TSPAN18Q96SJ8 248 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 BLOC1S4Q9NUP1 217 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 SLC38A7Q9NVC3 462 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 CLEC1BQ9P126 229 aa14.62□□□□□ -0.07
CCDC13-209ENST00000496027 NCOR1O75376 2440 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms