RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 STK3Q13188 491 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 SIM2Q14190 667 aaPredicted RBP11.53□□□□□ -0.56
C9orf78-207ENST00000495934 PPP2R5DQ14738 602 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 RABEP1Q15276 862 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 AASDHQ4L235 1098 aaPredicted RBP11.53□□□□□ -0.56
C9orf78-207ENST00000495934 CEP55Q53EZ4 464 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 TYW1BQ6NUM6 668 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 ZNF852Q6ZMS4 543 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 TAS1R1Q7RTX1 841 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 PALB2Q86YC2 1186 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 NECAB1Q8N987 351 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 KDF1Q8NAX2 398 aaPredicted RBP11.53□□□□□ -0.56
C9orf78-207ENST00000495934 URGCPQ8TCY9 931 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 NLRP7Q8WX94 980 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 FAM193BQ96PV7 902 aaPredicted RBP11.53□□□□□ -0.56
C9orf78-207ENST00000495934 KXD1Q9BQD3 176 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 TRAIPQ9BWF2 469 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 UPF2Q9HAU5 1272 aaKnown RBP11.53□□□□□ -0.56
C9orf78-207ENST00000495934 RXFP1Q9HBX9 757 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 CEP131Q9UPN4 1083 aa11.53□□□□□ -0.56
C9orf78-207ENST00000495934 MRPS17Q9Y2R5 130 aaKnown RBP11.53□□□□□ -0.56
C9orf78-207ENST00000495934 NRP1O14786 923 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 TM4SF5O14894 197 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 ADAMTS3O15072 1205 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 TGM5O43548 720 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 GAS2O43903 313 aaKnown RBP11.52□□□□□ -0.57
C9orf78-207ENST00000495934 DDHD2O94830 711 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 ALDH2P05091 517 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 IFNAR1P17181 557 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 NTHL1P78549 312 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 FZD5Q13467 585 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 ANKRD1Q15327 319 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 LRSAM1Q6UWE0 723 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 TMEM175Q9BSA9 504 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 PHF20Q9BVI0 1012 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 CHRDQ9H2X0 955 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 FAM105AQ9NUU6 356 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 LIMCH1Q9UPQ0 1083 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 PIN4Q9Y237 131 aaKnown RBP11.52□□□□□ -0.57
C9orf78-207ENST00000495934 PRG3Q9Y2Y8 225 aaPredicted RBP11.52□□□□□ -0.57
C9orf78-207ENST00000495934 MAFBQ9Y5Q3 323 aaPredicted RBP11.52□□□□□ -0.57
C9orf78-207ENST00000495934 ITPR1Q14643 2758 aa11.52□□□□□ -0.57
C9orf78-207ENST00000495934 CCDC196A0A1B0GTZ2 297 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 MEIS1O00470 390 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 PRPF3O43395 683 aaKnown RBP11.51□□□□□ -0.57
C9orf78-207ENST00000495934 FDPSP14324 419 aaKnown RBP11.51□□□□□ -0.57
C9orf78-207ENST00000495934 SFPQP23246 707 aaKnown RBP eCLIP11.51□□□□□ -0.57
C9orf78-207ENST00000495934 RAB27AP51159 221 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 DSG1Q02413 1049 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 WWC2Q6AWC2 1192 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 GRASPQ7Z6J2 395 aaPredicted RBP11.51□□□□□ -0.57
C9orf78-207ENST00000495934 GLYCTKQ8IVS8 523 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 FGF13Q92913 245 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 PGBD1Q96JS3 809 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 GCOM2Q9BZD3 368 aaPredicted RBP11.51□□□□□ -0.57
C9orf78-207ENST00000495934 SLKQ9H2G2 1235 aaPredicted RBP11.51□□□□□ -0.57
C9orf78-207ENST00000495934 HEBP1Q9NRV9 189 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 MARCH5Q9NX47 278 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 NDRG2Q9UN36 371 aaKnown RBP11.51□□□□□ -0.57
C9orf78-207ENST00000495934 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
C9orf78-207ENST00000495934 NOTCH4Q99466 2003 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 SRRM3A6NNA2 597 aaPredicted RBP11.5□□□□□ -0.57
C9orf78-207ENST00000495934 ZNF623O75123 536 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 ZMYND10O75800 440 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 KCNK5O95279 499 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 C1RP00736 705 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 NCLP19338 710 aaKnown RBP11.5□□□□□ -0.57
C9orf78-207ENST00000495934 CCR3P51677 355 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 AFF1P51825 1210 aaKnown RBP11.5□□□□□ -0.57
C9orf78-207ENST00000495934 RING1Q06587 406 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 SRSF5Q13243 272 aaKnown RBP11.5□□□□□ -0.57
C9orf78-207ENST00000495934 SF3A2Q15428 464 aaKnown RBP11.5□□□□□ -0.57
C9orf78-207ENST00000495934 PFKFB3Q16875 520 aaPredicted RBP11.5□□□□□ -0.57
C9orf78-207ENST00000495934 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 RNF168Q8IYW5 571 aaPredicted RBP11.5□□□□□ -0.57
C9orf78-207ENST00000495934 GTF3C6Q969F1 213 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 PGBD4Q96DM1 585 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 FAM167AQ96KS9 214 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 KANSL3Q9P2N6 904 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 MAST4O15021 2626 aa11.5□□□□□ -0.57
C9orf78-207ENST00000495934 HELZ2Q9BYK8 2649 aaKnown RBP11.49□□□□□ -0.57
C9orf78-207ENST00000495934 TDRD15B5MCY1 1934 aaKnown RBP11.49□□□□□ -0.57
C9orf78-207ENST00000495934 TMEM8BA6NDV4 472 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 SHISA7A6NL88 538 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 DHX15O43143 795 aaKnown RBP11.49□□□□□ -0.57
C9orf78-207ENST00000495934 HRO43593 1189 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 GABBR2O75899 941 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 EFEMP2O95967 443 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 POMCP01189 267 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 LILRA6Q6PI73 481 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 AGMOQ6ZNB7 445 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 ZNF687Q8N1G0 1237 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 FAM160A2Q8N612 972 aaPredicted RBP11.49□□□□□ -0.57
C9orf78-207ENST00000495934 C12orf50Q8NA57 414 aaPredicted RBP11.49□□□□□ -0.57
C9orf78-207ENST00000495934 B3GALT6Q96L58 329 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 AIFM3Q96NN9 605 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 IER2Q9BTL4 223 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 SLC26A6Q9BXS9 759 aa11.49□□□□□ -0.57
C9orf78-207ENST00000495934 RNF26Q9BY78 433 aaPredicted RBP11.49□□□□□ -0.57
C9orf78-207ENST00000495934 ANO3Q9BYT9 981 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms