RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 KCTD10Q9H3F6 313 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 NXF3Q9H4D5 531 aaKnown RBP12.09□□□□□ -0.47
KDM1A-205ENST00000494920 KIAA1468Q9P260 1216 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 HOOK1Q9UJC3 728 aaKnown RBP12.09□□□□□ -0.47
KDM1A-205ENST00000494920 IPPQ9Y573 584 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 EYSQ5T1H1 3165 aa12.09□□□□□ -0.47
KDM1A-205ENST00000494920 GRXCR1A8MXD5 290 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 HNRNPDLO14979 420 aaKnown RBP12.08□□□□□ -0.48
KDM1A-205ENST00000494920 DGKIO75912 1065 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 SMC2O95347 1197 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 NPTXRO95502 500 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 EOMESO95936 686 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 MCF2P10911 925 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
KDM1A-205ENST00000494920 KCNJ6P48051 423 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 GATMP50440 423 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 NOLC1Q14978 699 aaKnown RBP eCLIP12.08□□□□□ -0.48
KDM1A-205ENST00000494920 CAMK4Q16566 473 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 ZCWPW2Q504Y3 356 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 ZNF658Q5TYW1 1059 aaPredicted RBP12.08□□□□□ -0.48
KDM1A-205ENST00000494920 C12orf56Q8IXR9 622 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 SMYD4Q8IYR2 804 aaPredicted RBP12.08□□□□□ -0.48
KDM1A-205ENST00000494920 GUF1Q8N442 669 aaKnown RBP12.08□□□□□ -0.48
KDM1A-205ENST00000494920 CEP120Q8N960 986 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 GSTCDQ8NEC7 633 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 TMEM63CQ9P1W3 806 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 HES2Q9Y543 173 aa12.08□□□□□ -0.48
KDM1A-205ENST00000494920 ARHGEF15O94989 841 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 SKIP12755 728 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
KDM1A-205ENST00000494920 GRM5P41594 1212 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 LIG4P49917 911 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 KLHL40Q2TBA0 621 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 ZNF568Q3ZCX4 644 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 ZBTB41Q5SVQ8 909 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 STXBP4Q6ZWJ1 553 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 TMEM192Q8IY95 271 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 ZSWIM2Q8NEG5 633 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 LPPQ93052 612 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 CBWD1Q9BRT8 395 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 TMEM206Q9H813 350 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 RMND1Q9NWS8 449 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 YBX2Q9Y2T7 364 aaKnown RBP12.07□□□□□ -0.48
KDM1A-205ENST00000494920 MYO7AQ13402 2215 aa12.07□□□□□ -0.48
KDM1A-205ENST00000494920 LCHNA4D1U4 455 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 OFD1O75665 1012 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 RECQL4O94761 1208 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 ADRB2P07550 413 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 FGFR1P11362 822 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 GARTP22102 1010 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 PRCPP42785 496 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 AFF1P51825 1210 aaKnown RBP12.06□□□□□ -0.48
KDM1A-205ENST00000494920 SNRPFP62306 86 aaKnown RBP12.06□□□□□ -0.48
KDM1A-205ENST00000494920 SMAD3P84022 425 aaKnown RBP12.06□□□□□ -0.48
KDM1A-205ENST00000494920 NCBP1Q09161 790 aaKnown RBP12.06□□□□□ -0.48
KDM1A-205ENST00000494920 NFIL3Q16649 462 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 KNOP1Q1ED39 458 aaKnown RBP12.06□□□□□ -0.48
KDM1A-205ENST00000494920 XKR4Q5GH76 650 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 CRELD2Q6UXH1 353 aaPredicted RBP12.06□□□□□ -0.48
KDM1A-205ENST00000494920 ALKAL1Q6UXT8 129 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 NELFCDQ8IXH7 590 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 ADSSL1Q8N142 457 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 TRIML1Q8N9V2 468 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 CCDC47Q96A33 483 aaKnown RBP12.06□□□□□ -0.48
KDM1A-205ENST00000494920 FBXL18Q96ME1 805 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 CASD1Q96PB1 797 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 RAD9AQ99638 391 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 ADPGKQ9BRR6 497 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 PBX4Q9BYU1 374 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 GBP3Q9H0R5 595 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 CXCL16Q9H2A7 254 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 AGPAT3Q9NRZ7 376 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 DMAC2Q9NW81 257 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 ANKFY1Q9P2R3 1169 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 EXOC7Q9UPT5 735 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 PCDHA11Q9Y5I1 949 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 PRUNE2Q8WUY3 3088 aa12.06□□□□□ -0.48
KDM1A-205ENST00000494920 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.05□□□□□ -0.48
KDM1A-205ENST00000494920 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.05□□□□□ -0.48
KDM1A-205ENST00000494920 PPP1R3GB7ZBB8 358 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 SOX1O00570 391 aaPredicted RBP12.05□□□□□ -0.48
KDM1A-205ENST00000494920 PTGESO14684 152 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 OGTO15294 1046 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 CLDN3O15551 220 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 B4GALT3O60512 393 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 UPP2O95045 317 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 STAG3L1P0CL83 205 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 MYOGP15173 224 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 PBX2P40425 430 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 TNFSF9P41273 254 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 RABGGTBP53611 331 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 NAB2Q15742 525 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 CCDC183Q5T5S1 534 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 LRRC55Q6ZSA7 311 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 ZBTB33Q86T24 672 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 ZC3H3Q8IXZ2 948 aaKnown RBP12.05□□□□□ -0.48
KDM1A-205ENST00000494920 RSPH1Q8WYR4 309 aa12.05□□□□□ -0.48
KDM1A-205ENST00000494920 BICD1Q96G01 975 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms