RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 C2orf71A6NGG8 1288 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 NRP1O14786 923 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 STX6O43752 255 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 GUCY2CP25092 1073 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 SLC12A3P55017 1021 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 CEBPZQ03701 1054 aaKnown RBP19.81■□□□□ 0.76
COL20A1-207ENST00000494913 NT5DC1Q5TFE4 455 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 EEF1DP3Q658K8 133 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 COLGALT2Q8IYK4 626 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 GSTCDQ8NEC7 633 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 AUTS2Q8WXX7 1259 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 ZBP1Q9H171 429 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 KMT5AQ9NQR1 393 aa19.81■□□□□ 0.76
COL20A1-207ENST00000494913 PRG3Q9Y2Y8 225 aaPredicted RBP19.81■□□□□ 0.76
COL20A1-207ENST00000494913 MBTPS2O43462 519 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 SLC26A4O43511 780 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 MARCKSP29966 332 aaPredicted RBP19.8■□□□□ 0.76
COL20A1-207ENST00000494913 OR1G1P47890 313 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 SMAD4Q13485 552 aaKnown RBP19.8■□□□□ 0.76
COL20A1-207ENST00000494913 PTPAQ15257 358 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 ATF7IP2Q5U623 682 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 LLGL2Q6P1M3 1020 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 RASSF8Q8NHQ8 419 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 VN1R3Q9BXE9 311 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 C17orf75Q9HAS0 396 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 CD320Q9NPF0 282 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 SNTG2Q9NY99 539 aa19.8■□□□□ 0.76
COL20A1-207ENST00000494913 RBM19Q9Y4C8 960 aaKnown RBP19.8■□□□□ 0.76
COL20A1-207ENST00000494913 NPHP3-ACAD11A0A0J9YXS1 232 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.79■□□□□ 0.76
COL20A1-207ENST00000494913 SLC16A4O15374 487 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 CTSAP10619 480 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 DSC1Q08554 894 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 COASYQ13057 564 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 DHX8Q14562 1220 aaKnown RBP19.79■□□□□ 0.76
COL20A1-207ENST00000494913 KARSQ15046 597 aaKnown RBP19.79■□□□□ 0.76
COL20A1-207ENST00000494913 SMAD2Q15796 467 aaKnown RBP19.79■□□□□ 0.76
COL20A1-207ENST00000494913 HSCBQ8IWL3 235 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 TMEM87AQ8NBN3 555 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 TMEM134Q9H6X4 195 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 KCND2Q9NZV8 630 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 ARHGAP28Q9P2N2 729 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 NR1I2O75469 434 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 SSTR3P32745 418 aaPredicted RBP19.79■□□□□ 0.76
COL20A1-207ENST00000494913 KCNC3Q14003 757 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 ARSHQ5FYA8 562 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 SPECC1Q5M775 1068 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 GJD3Q8N144 294 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 SMRP1Q8NCR6 262 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 LRRC15Q8TF66 581 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 RPS6KC1Q96S38 1066 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 NTPCRQ9BSD7 190 aaKnown RBP19.79■□□□□ 0.76
COL20A1-207ENST00000494913 ZSCAN16Q9H4T2 348 aaPredicted RBP19.79■□□□□ 0.76
COL20A1-207ENST00000494913 GDAQ9Y2T3 454 aa19.79■□□□□ 0.76
COL20A1-207ENST00000494913 PHLPP2Q6ZVD8 1323 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 CLASP2O75122 1294 aaKnown RBP19.78■□□□□ 0.76
COL20A1-207ENST00000494913 RECQL4O94761 1208 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 SRGAP2BP0DMP2 458 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 PLS3P13797 630 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 PLCG1P19174 1290 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 SMTNP53814 917 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 CACNB1Q02641 598 aaPredicted RBP19.78■□□□□ 0.76
COL20A1-207ENST00000494913 GRIK3Q13003 919 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 DCAF4L1Q3SXM0 396 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 TMEM184AQ6ZMB5 413 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 TAS1R3Q7RTX0 852 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 GPBP1Q86WP2 473 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 SPIRE2Q8WWL2 714 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 EPSTI1Q96J88 318 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 ACO2Q99798 780 aaKnown RBP19.78■□□□□ 0.76
COL20A1-207ENST00000494913 MRPL4Q9BYD3 311 aaKnown RBP19.78■□□□□ 0.76
COL20A1-207ENST00000494913 BLOC1S4Q9NUP1 217 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 MARCH5Q9NX47 278 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 STK39Q9UEW8 545 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 KCNG1Q9UIX4 513 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 TNFSF13BQ9Y275 285 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 IRAK3Q9Y616 596 aa19.78■□□□□ 0.76
COL20A1-207ENST00000494913 ZMYM2Q9UBW7 1377 aa19.77■□□□□ 0.76
COL20A1-207ENST00000494913 HSP90AA1P07900 732 aaKnown RBP19.77■□□□□ 0.76
COL20A1-207ENST00000494913 GIT2Q14161 759 aa19.77■□□□□ 0.76
COL20A1-207ENST00000494913 USP49Q70CQ1 688 aa19.77■□□□□ 0.76
COL20A1-207ENST00000494913 APBB1IPQ7Z5R6 666 aaPredicted RBP19.77■□□□□ 0.76
COL20A1-207ENST00000494913 TARS2Q9BW92 718 aaKnown RBP19.77■□□□□ 0.76
COL20A1-207ENST00000494913 COLEC11Q9BWP8 271 aa19.77■□□□□ 0.76
COL20A1-207ENST00000494913 CCSER1Q9C0I3 900 aa19.77■□□□□ 0.76
COL20A1-207ENST00000494913 PRKAG3Q9UGI9 489 aa19.77■□□□□ 0.76
COL20A1-207ENST00000494913 FBXO2Q9UK22 296 aaPredicted RBP19.77■□□□□ 0.76
COL20A1-207ENST00000494913 SRPRBQ9Y5M8 271 aaKnown RBP19.77■□□□□ 0.76
COL20A1-207ENST00000494913 TDRD15B5MCY1 1934 aaKnown RBP19.76■□□□□ 0.75
COL20A1-207ENST00000494913 F8W810 466 aa19.76■□□□□ 0.75
COL20A1-207ENST00000494913 ZP2Q05996 745 aa19.76■□□□□ 0.75
COL20A1-207ENST00000494913 MCM6Q14566 821 aa19.76■□□□□ 0.75
COL20A1-207ENST00000494913 PTPN14Q15678 1187 aa19.76■□□□□ 0.75
COL20A1-207ENST00000494913 ANKRD54Q6NXT1 300 aa19.76■□□□□ 0.75
COL20A1-207ENST00000494913 ADHFE1Q8IWW8 467 aa19.76■□□□□ 0.75
COL20A1-207ENST00000494913 RABGGTAQ92696 567 aa19.76■□□□□ 0.75
COL20A1-207ENST00000494913 RAD54LQ92698 747 aa19.76■□□□□ 0.75
COL20A1-207ENST00000494913 CLIC6Q96NY7 704 aa19.76■□□□□ 0.75
COL20A1-207ENST00000494913 USP28Q96RU2 1077 aa19.76■□□□□ 0.75
COL20A1-207ENST00000494913 CXCL16Q9H2A7 254 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms