RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 H2AFVQ71UI9 128 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 DAAM2Q86T65 1068 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 RNF10Q8N5U6 811 aaKnown RBP11.24□□□□□ -0.61
SAMM50-206ENST00000494795 CHST13Q8NET6 341 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 UBXN6Q9BZV1 441 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 ZBTB42B2RXF5 422 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 FAM153BP0C7A2 387 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 FERP16591 822 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 EDNRBP24530 442 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 IREB2P48200 963 aaKnown RBP11.24□□□□□ -0.61
SAMM50-206ENST00000494795 PPARDQ03181 441 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 CAPSQ13938 189 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 BRD3Q15059 726 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 FAM153CQ494X1 144 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 XKR3Q5GH77 459 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 CCDC181Q5TID7 509 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 ZBTB33Q86T24 672 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 ERO1BQ86YB8 467 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 GOLGA5Q8TBA6 731 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 KRT12Q99456 494 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 TRIM7Q9C029 511 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 DHX33Q9H6R0 707 aaKnown RBP11.24□□□□□ -0.61
SAMM50-206ENST00000494795 FAM153AQ9UHL3 310 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 LOXHD1Q8IVV2 1947 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 TMEM110-MUSTN1A8MSY1 372 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 SRGAP2CP0DJJ0 459 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 IRX5P78411 483 aaPredicted RBP11.24□□□□□ -0.61
SAMM50-206ENST00000494795 TUBB2AQ13885 445 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 XRRA1Q6P2D8 792 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 C12orf56Q8IXR9 622 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 ANKRD13AQ8IZ07 590 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 SAMD3Q8N6K7 520 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 OR5B17Q8NGF7 314 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 EPS8L1Q8TE68 723 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 KIFAP3Q92845 792 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 AGPAT1Q99943 283 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 TUBB2BQ9BVA1 445 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 MKI67P46013 3256 aaKnown RBP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 KIF4AO95239 1232 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 FTLP02792 175 aaPredicted RBP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 TNFAIP3P21580 790 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 TNNT3P45378 269 aaPredicted RBP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 STAT5BP51692 787 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 PPATQ06203 517 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 DDX42Q86XP3 938 aaKnown RBP eCLIP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 DNERQ8NFT8 737 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 PRPF31Q8WWY3 499 aaKnown RBP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 NOCTQ9UK39 431 aaKnown RBP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 ZNFX1Q9P2E3 1918 aaKnown RBP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 IGKV6D-21A0A0A0MT36 114 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 CEP104O60308 925 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 CARSP49589 748 aaKnown RBP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 OSTNP61366 133 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 KIF22Q14807 665 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 TDRD10Q5VZ19 366 aaKnown RBP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 WDR93Q6P2C0 686 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 CCNI2Q6ZMN8 369 aaPredicted RBP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 NT5DC3Q86UY8 548 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 CEP120Q8N960 986 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 FBXL18Q96ME1 805 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 IWS1Q96ST2 819 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 AGTPBP1Q9UPW5 1226 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 ZC3H4Q9UPT8 1303 aaKnown RBP11.23□□□□□ -0.61
SAMM50-206ENST00000494795 LAMA3Q16787 3333 aa11.23□□□□□ -0.61
SAMM50-206ENST00000494795 B4GALT5O43286 388 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 VNN1O95497 513 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 TCP1P17987 556 aaKnown RBP11.22□□□□□ -0.61
SAMM50-206ENST00000494795 ICAM3P32942 547 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 NF2P35240 595 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 LIG4P49917 911 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 FAM193AP78312 1265 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 SPIRE2Q8WWL2 714 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 ALG3Q92685 438 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 KRT35Q92764 455 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 GLG1Q92896 1179 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 MFSD14AQ96MC6 490 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 RNPEPQ9H4A4 650 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 APOBEC3GQ9HC16 384 aaKnown RBP11.22□□□□□ -0.61
SAMM50-206ENST00000494795 RAB20Q9NX57 234 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 STXBP5LQ9Y2K9 1186 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 BZW2Q9Y6E2 419 aaKnown RBP11.22□□□□□ -0.61
SAMM50-206ENST00000494795 LOC285556D6RIA3 1793 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 IQCF3P0C7M6 154 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 ARL2P36404 184 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 FMO1Q01740 532 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 TARBP2Q15633 366 aaKnown RBP11.22□□□□□ -0.61
SAMM50-206ENST00000494795 KRT39Q6A163 491 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 TMEM192Q8IY95 271 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 GPD1LQ8N335 351 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 TSEN2Q8NCE0 465 aaKnown RBP11.22□□□□□ -0.61
SAMM50-206ENST00000494795 RDM1Q8NG50 284 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 HNRNPLLQ8WVV9 542 aaKnown RBP11.22□□□□□ -0.61
SAMM50-206ENST00000494795 DDX47Q9H0S4 455 aaKnown RBP11.22□□□□□ -0.61
SAMM50-206ENST00000494795 RAD51CO43502 376 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 PRLRP16471 622 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 IGBP1P78318 339 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 CKAP4Q07065 602 aaKnown RBP11.22□□□□□ -0.61
SAMM50-206ENST00000494795 RPS6KA1Q15418 735 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 TERF2Q15554 542 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms