RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 TRAIPQ9BWF2 469 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 FAN1Q9Y2M0 1017 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 HES2Q9Y543 173 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 ZFHX4Q86UP3 3567 aa13.07□□□□□ -0.32
CSNK1E-212ENST00000494610 EPG5Q9HCE0 2579 aa13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 ZNF623O75123 536 aa13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 BAG4O95429 457 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 GLULP15104 373 aa13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 RPL17P18621 184 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 SFNP31947 248 aa13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 OR1G1P47890 313 aa13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 ORC2Q13416 577 aaPredicted RBP13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 SMG8Q8ND04 991 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 PRPF31Q8WWY3 499 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 ZNF707Q96C28 371 aaPredicted RBP13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 ZFP42Q96MM3 310 aa13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 EMILIN2Q9BXX0 1053 aa13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 EIF2AQ9BY44 585 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 TBC1D17Q9HA65 648 aa13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 RSAD1Q9HA92 442 aa13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 MRPL17Q9NRX2 175 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 AGPAT5Q9NUQ2 364 aa13.06□□□□□ -0.32
CSNK1E-212ENST00000494610 BTBD18B2RXH4 712 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 INPPL1O15357 1258 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 SLC37A4O43826 429 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 YEATS4O95619 227 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 ALDH2P05091 517 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 DNM2P50570 870 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 GIT2Q14161 759 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 NONOQ15233 471 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 Q4G0T1 1027 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 MRPL10Q7Z7H8 261 aaKnown RBP13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 PPFIBP1Q86W92 1011 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 ETNPPLQ8TBG4 499 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 URGCPQ8TCY9 931 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 CPB2Q96IY4 423 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 RPS6KC1Q96S38 1066 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 RTP3Q9BQQ7 232 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 FOXQ1Q9C009 403 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 COL4A3BPQ9Y5P4 624 aa13.05□□□□□ -0.32
CSNK1E-212ENST00000494610 SOD2P04179 222 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 MLH1P40692 756 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 USP11P51784 963 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 NTHL1P78549 312 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 NPY5RQ15761 445 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 KIAA0319Q5VV43 1072 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 C15orf39Q6ZRI6 1047 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 GET4Q7L5D6 327 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 ERMP1Q7Z2K6 904 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 ZNF410Q86VK4 478 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 CDR2LQ86X02 465 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 COLGALT2Q8IYK4 626 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 SMG7Q92540 1137 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 TNFRSF25Q93038 417 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 PGBD4Q96DM1 585 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 FAM193BQ96PV7 902 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 GAD1Q99259 594 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 APOL6Q9BWW8 343 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 WDR6Q9NNW5 1121 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 GJB4Q9NTQ9 266 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 DLGAP2Q9P1A6 1054 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 CLUHO75153 1309 aa13.04□□□□□ -0.32
CSNK1E-212ENST00000494610 ARL5CA6NH57 179 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 M0R2N6 131 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 EFEMP2O95967 443 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 LMNAP02545 664 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 URODP06132 367 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 SKIP12755 728 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 GCFC2P16383 781 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 RAB27AP51159 221 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 SCNN1GP51170 649 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 DNM1Q05193 864 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 LAMTOR4Q0VGL1 99 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 NR5A1Q13285 461 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 RNF168Q8IYW5 571 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 SPATA32Q96LK8 384 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 HERC2P3Q9BVR0 1158 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 GPR62Q9BZJ7 368 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 INO80BQ9C086 356 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 IGSF9Q9P2J2 1179 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 WNT16Q9UBV4 365 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 VAV3Q9UKW4 847 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 IPPQ9Y573 584 aa13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 MORC2Q9Y6X9 1032 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-212ENST00000494610 TDRD15B5MCY1 1934 aaKnown RBP13.02□□□□□ -0.32
CSNK1E-212ENST00000494610 MTCL1Q9Y4B5 1905 aaKnown RBP13.02□□□□□ -0.32
CSNK1E-212ENST00000494610 CYP3A7-CYP3A51PA0A087WV96 503 aa13.02□□□□□ -0.33
CSNK1E-212ENST00000494610 A0A087WWV3 80 aa13.02□□□□□ -0.33
CSNK1E-212ENST00000494610 TGM5O43548 720 aa13.02□□□□□ -0.33
CSNK1E-212ENST00000494610 GLUD1P00367 558 aa13.02□□□□□ -0.33
CSNK1E-212ENST00000494610 SP9P0CG40 484 aa13.02□□□□□ -0.33
CSNK1E-212ENST00000494610 ITGA4P13612 1032 aa13.02□□□□□ -0.33
CSNK1E-212ENST00000494610 RFX1P22670 979 aa13.02□□□□□ -0.33
CSNK1E-212ENST00000494610 CYP3A7P24462 503 aa13.02□□□□□ -0.33
CSNK1E-212ENST00000494610 AKAP5P24588 427 aa13.02□□□□□ -0.33
CSNK1E-212ENST00000494610 NASPP49321 788 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-212ENST00000494610 GLUD2P49448 558 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms