RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PDZD7Q9H5P4 517 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 C17orf75Q9HAS0 396 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 BARX2Q9UMQ3 279 aaPredicted RBP14.54□□□□□ -0.08
ERCC3-209ENST00000494464 IRAK3Q9Y616 596 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 BDP1A6H8Y1 2624 aa14.54□□□□□ -0.08
ERCC3-209ENST00000494464 MYH11P35749 1972 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 MYH15Q9Y2K3 1946 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 C2orf71A6NGG8 1288 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 TTLL13PA6NNM8 815 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 PER2O15055 1255 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 PRPF40AO75400 957 aaKnown RBP14.53□□□□□ -0.08
ERCC3-209ENST00000494464 EDN1P05305 212 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 CTSAP10619 480 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 SCNN1GP51170 649 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 MAPK7Q13164 816 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 DMP1Q13316 513 aaPredicted RBP14.53□□□□□ -0.08
ERCC3-209ENST00000494464 GIT2Q14161 759 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 CLUL1Q15846 466 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 RINT1Q6NUQ1 792 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 C1orf186Q6ZWK4 172 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 CDR2LQ86X02 465 aaPredicted RBP14.53□□□□□ -0.08
ERCC3-209ENST00000494464 COLGALT2Q8IYK4 626 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 VPS52Q8N1B4 723 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 MRPL43Q8N983 215 aaKnown RBP14.53□□□□□ -0.08
ERCC3-209ENST00000494464 SYT2Q8N9I0 419 aaPredicted RBP14.53□□□□□ -0.08
ERCC3-209ENST00000494464 CDK5RAP3Q96JB5 506 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 ZFP42Q96MM3 310 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 ADPGKQ9BRR6 497 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 KIFC3Q9BVG8 833 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 KCND2Q9NZV8 630 aa14.53□□□□□ -0.08
ERCC3-209ENST00000494464 HIP1RO75146 1068 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 LONP1P36776 959 aaKnown RBP14.52□□□□□ -0.08
ERCC3-209ENST00000494464 NPTX2P47972 431 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 ZP2Q05996 745 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 GRIK3Q13003 919 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 RESTQ13127 1097 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 SF3A1Q15459 793 aaKnown RBP14.52□□□□□ -0.08
ERCC3-209ENST00000494464 DCAF4L1Q3SXM0 396 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 CABP7Q86V35 215 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 ADHFE1Q8IWW8 467 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 GSTCDQ8NEC7 633 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 APOL6Q9BWW8 343 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 VN1R3Q9BXE9 311 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 ZSCAN16Q9H4T2 348 aaPredicted RBP14.52□□□□□ -0.08
ERCC3-209ENST00000494464 MARCH5Q9NX47 278 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 ARHGAP28Q9P2N2 729 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 FAN1Q9Y2M0 1017 aa14.52□□□□□ -0.08
ERCC3-209ENST00000494464 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.51□□□□□ -0.09
ERCC3-209ENST00000494464 NRP1O14786 923 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 ALDH2P05091 517 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 AKAP5P24588 427 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 SLC12A3P55017 1021 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 PEX3P56589 373 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 ZRSR1Q15695 479 aaKnown RBP14.51□□□□□ -0.09
ERCC3-209ENST00000494464 TMEM132AQ24JP5 1023 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 GJD3Q8N144 294 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 RPS6KC1Q96S38 1066 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 POP1Q99575 1024 aaKnown RBP14.51□□□□□ -0.09
ERCC3-209ENST00000494464 TMEM134Q9H6X4 195 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 POLD4Q9HCU8 107 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 CD320Q9NPF0 282 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 C5orf42Q9H799 3197 aa14.51□□□□□ -0.09
ERCC3-209ENST00000494464 C19orf67A6NJJ6 358 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 K7ERI5 159 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 RECQL4O94761 1208 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 CXCL14O95715 111 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 EFEMP2O95967 443 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 PLA2G4BP0C869 781 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 HOXB8P17481 243 aaPredicted RBP14.5□□□□□ -0.09
ERCC3-209ENST00000494464 UBA7P41226 1012 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 RBM10P98175 930 aaKnown RBP14.5□□□□□ -0.09
ERCC3-209ENST00000494464 PTPN14Q15678 1187 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 NT5DC1Q5TFE4 455 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 ATF7IP2Q5U623 682 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 EEF1DP3Q658K8 133 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 ANKRD54Q6NXT1 300 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 APBB1IPQ7Z5R6 666 aaPredicted RBP14.5□□□□□ -0.09
ERCC3-209ENST00000494464 RNF168Q8IYW5 571 aaPredicted RBP14.5□□□□□ -0.09
ERCC3-209ENST00000494464 GPT2Q8TD30 523 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 SPIRE2Q8WWL2 714 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 CASP10Q92851 521 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 CALML4Q96GE6 196 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 CHAMP1Q96JM3 812 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 KMT5AQ9NQR1 393 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 MIOSQ9NXC5 875 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 PARP2Q9UGN5 583 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 KCNG1Q9UIX4 513 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 TNFSF13BQ9Y275 285 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 PRG3Q9Y2Y8 225 aaPredicted RBP14.5□□□□□ -0.09
ERCC3-209ENST00000494464 HCFC2Q9Y5Z7 792 aa14.5□□□□□ -0.09
ERCC3-209ENST00000494464 MORC2Q9Y6X9 1032 aaPredicted RBP14.5□□□□□ -0.09
ERCC3-209ENST00000494464 CCDC169A6NNP5 214 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 NR1I2O75469 434 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 SOD2P04179 222 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 LIG1P18858 919 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 OR1G1P47890 313 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 KRT85P78386 507 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 PTPAQ15257 358 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 TAS1R3Q7RTX0 852 aa14.49□□□□□ -0.09
ERCC3-209ENST00000494464 SUSD6Q92537 303 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms