RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 L1CAMP32004 1257 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 CYP2C19P33261 490 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 GRIA2P42262 883 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 KCNJ6P48051 423 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 SEPHS1P49903 392 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 GFRA1P56159 465 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 SUMO1P63165 101 aaKnown RBP6.23□□□□□ -1.41
PTCD3-219ENST00000494323 ATP8B2P98198 1209 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 MAP4K2Q12851 820 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 CBX2Q14781 532 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-219ENST00000494323 TM4SF20Q53R12 229 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 FAM209AQ5JX71 171 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 RTP2Q5QGT7 225 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 LCE1DQ5T752 114 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 ANO1Q5XXA6 986 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 OGFOD2Q6N063 350 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 SLC23A3Q6PIS1 610 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 CATSPERGQ6ZRH7 1159 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 ACER1Q8TDN7 264 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 SOCS4Q8WXH5 440 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 OSBP2Q969R2 916 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 MCMBPQ9BTE3 642 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 DHRS4Q9BTZ2 278 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 CARS2Q9HA77 564 aaKnown RBP6.23□□□□□ -1.41
PTCD3-219ENST00000494323 NCOA5Q9HCD5 579 aaKnown RBP6.23□□□□□ -1.41
PTCD3-219ENST00000494323 BTBD7Q9P203 1132 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 STXBP5LQ9Y2K9 1186 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 MRPS23Q9Y3D9 190 aaKnown RBP6.23□□□□□ -1.41
PTCD3-219ENST00000494323 RABGAP1Q9Y3P9 1069 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 FPGT-TNNI3KV9GXZ4 949 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 CDK5RAP2Q96SN8 1893 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 DNAH12Q6ZR08 3092 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 LOC285556D6RIA3 1793 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 DNAJC25-GNG10A0A024R161 153 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 SLC15A5A6NIM6 579 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 IFNGR1P15260 489 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 RPL10P27635 214 aaKnown RBP6.22□□□□□ -1.41
PTCD3-219ENST00000494323 PLCD1P51178 756 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 CCNA1P78396 465 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 ZP2Q05996 745 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 SCRN1Q12765 414 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 C21orf62-AS1Q17RA5 79 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 ABCB5Q2M3G0 1257 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 CERKLQ49MI3 558 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-219ENST00000494323 PRAMEF19Q5SWL8 479 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 GJC2Q5T442 439 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-219ENST00000494323 MFSD14CQ5VZR4 134 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 TATDN1Q6P1N9 297 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 ATF7IPQ6VMQ6 1270 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 KSR1Q8IVT5 923 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 TMEM57Q8N5G2 664 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 MAGEB6Q8N7X4 407 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 TRPV1Q8NER1 839 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 NPLOC4Q8TAT6 608 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 COPS5Q92905 334 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 NINJ1Q92982 152 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 EAF2Q96CJ1 260 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-219ENST00000494323 CCDC120Q96HB5 630 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 LBHD1Q9BQE6 289 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-219ENST00000494323 CDADC1Q9BWV3 514 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 SERPINB13Q9UIV8 391 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 ZNF281Q9Y2X9 895 aa6.22□□□□□ -1.41
PTCD3-219ENST00000494323 COL2A1P02458 1487 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-219ENST00000494323 MYH1P12882 1939 aa6.21□□□□□ -1.41
PTCD3-219ENST00000494323 SIPA1L1O43166 1804 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 TRBV23OR9-2A0A075B6M9 112 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 TMEM82A0PJX8 343 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 FGF10O15520 208 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-219ENST00000494323 DLX3O60479 287 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 RFPL3O75679 317 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 GLRX3O76003 335 aaKnown RBP6.21□□□□□ -1.42
PTCD3-219ENST00000494323 VCAM1P19320 739 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 ECI1P42126 302 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 IGBP1P78318 339 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 RBM10P98175 930 aaKnown RBP6.21□□□□□ -1.42
PTCD3-219ENST00000494323 SEPT2Q15019 361 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 SHHQ15465 462 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 CYP2R1Q6VVX0 501 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 DPP9Q86TI2 863 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 THNSL2Q86YJ6 484 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 NAT16Q8N8M0 369 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 TMEM145Q8NBT3 493 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 SSH3Q8TE77 659 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 FAM168AQ92567 244 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 FERMT2Q96AC1 680 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 MFSD3Q96ES6 412 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 FCRL2Q96LA5 508 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-219ENST00000494323 CLUHP3Q96NS8 147 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 GUCD1Q96NT3 240 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 ALPK1Q96QP1 1244 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 RPAP3Q9H6T3 665 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-219ENST00000494323 CABP5Q9NP86 173 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 GPR108Q9NPR9 543 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 PRDM7Q9NQW5 492 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 AP5S1Q9NUS5 200 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 DDX20Q9UHI6 824 aaKnown RBP6.21□□□□□ -1.42
PTCD3-219ENST00000494323 DBNLQ9UJU6 430 aaKnown RBP6.21□□□□□ -1.42
PTCD3-219ENST00000494323 ATP11BQ9Y2G3 1177 aa6.21□□□□□ -1.42
PTCD3-219ENST00000494323 LAMA2P24043 3122 aaKnown RBP6.2□□□□□ -1.42
PTCD3-219ENST00000494323 A0A087X0B3 334 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms