RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SRGAP2BP0DMP2 458 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 PRLRP16471 622 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 HOXB8P17481 243 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 CYLC1P35663 651 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 USP8P40818 1118 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 ATP2C1P98194 919 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 APBA1Q02410 837 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 PAK1Q13153 545 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 STIM1Q13586 685 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 KCNB1Q14721 858 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 KARSQ15046 597 aaKnown RBP11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 CELF3Q5SZQ8 465 aaKnown RBP11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 ZNF658Q5TYW1 1059 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 PDE12Q6L8Q7 609 aaKnown RBP11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 ANKRD54Q6NXT1 300 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 FAM114A1Q8IWE2 563 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 SLC35F6Q8N357 371 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 FANCBQ8NB91 859 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 DTWD2Q8NBA8 298 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 SYTL5Q8TDW5 730 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 PAGE5Q96GU1 130 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 AIFM3Q96NN9 605 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 DNAJC7Q99615 494 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 TMEM47Q9BQJ4 181 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 RTP3Q9BQQ7 232 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 PHF20Q9BVI0 1012 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 MFSD1Q9H3U5 465 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 THAP9Q9H5L6 903 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 TUT1Q9H6E5 874 aaKnown RBP11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 PDE11AQ9HCR9 933 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 SAMSN1Q9NSI8 373 aaKnown RBP11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 VPS18Q9P253 973 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 CACNA1IQ9P0X4 2223 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 SRRM3A6NNA2 597 aaPredicted RBP11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 C2CD4DB7Z1M9 353 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 PPP1R3GB7ZBB8 358 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 CHRNA1P02708 482 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 GOLGA8HP0CJ92 632 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 GNAT1P11488 350 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 NPR3P17342 541 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 TNFRSF8P28908 595 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 LONP1P36776 959 aaKnown RBP11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 COPB1P53618 953 aaKnown RBP11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 CORO7P57737 925 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 MEA1Q16626 185 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 ISM2Q6H9L7 571 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 KCNV1Q6PIU1 500 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 FOXR2Q6PJQ5 311 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 ZNF654Q8IZM8 581 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 ZDHHC14Q8IZN3 488 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 OR8K1Q8NGG5 319 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 ESR2Q92731 530 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 NECTIN4Q96NY8 510 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 RMDN3Q96TC7 470 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 UBAC1Q9BSL1 405 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 CSRNP2Q9H175 543 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 SMOC2Q9H3U7 446 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 ABCB6Q9NP58 842 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 LZTFL1Q9NQ48 299 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 ZSWIM5Q9P217 1185 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 ABCB11O95342 1321 aa11.6□□□□□ -0.55
PDLIM1-205ENST00000493949 A0A1W2PQJ5 194 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 LGALS16A8MUM7 142 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 LAD1O00515 517 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 FSCN2O14926 492 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 N4BP3O15049 544 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 PI15O43692 258 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 NDUFA10O95299 355 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 GHRP10912 638 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 PDHBP11177 359 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 SDHBP21912 280 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 CASP14P31944 242 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 ARHGAP25P42331 645 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 DNM2P50570 870 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 MGAT3Q09327 533 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 NNTQ13423 1086 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 MCM6Q14566 821 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 LPIN1Q14693 890 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 RSPO4Q2I0M5 234 aaPredicted RBP11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 TTC31Q49AM3 519 aaPredicted RBP11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 COBLL1Q53SF7 1204 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 DNAJC21Q5F1R6 531 aaKnown RBP11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 TCP11X2Q5H9J9 407 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 RRP12Q5JTH9 1297 aaKnown RBP11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 COG1Q8WTW3 980 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 LINC01599Q8WXQ3 324 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 CCDC47Q96A33 483 aaKnown RBP11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 SPATA33Q96N06 139 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 MED15Q96RN5 788 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 PNKPQ96T60 521 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 TACO1Q9BSH4 297 aaKnown RBP11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 DESI2Q9BSY9 194 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 UBA5Q9GZZ9 404 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 BCAS3Q9H6U6 928 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 GJB4Q9NTQ9 266 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 CAPN11Q9UMQ6 739 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 PCDHB6Q9Y5E3 794 aa11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 SAR1BQ9Y6B6 198 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms