RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CARSP49589 748 aaKnown RBP14.87□□□□□ -0.03
VCP-207ENST00000493886 ALDH5A1P51649 535 aaPredicted RBP14.87□□□□□ -0.03
VCP-207ENST00000493886 GALCP54803 685 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 MCCD1P59942 119 aaPredicted RBP14.87□□□□□ -0.03
VCP-207ENST00000493886 KIF22Q14807 665 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 ZKSCAN8Q15776 578 aaPredicted RBP14.87□□□□□ -0.03
VCP-207ENST00000493886 MTERF2Q49AM1 385 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 SLC39A4Q6P5W5 647 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 LRRC57Q8N9N7 239 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 TPCN2Q8NHX9 752 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 RUFY1Q96T51 708 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 RNF181Q9P0P0 153 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 PAPPA2Q9BXP8 1791 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 FAM153BP0C7A2 387 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 ATP1A2P50993 1020 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 GUCY2DQ02846 1103 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 FAM153CQ494X1 144 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 ZC3H12AQ5D1E8 599 aaKnown RBP14.87□□□□□ -0.03
VCP-207ENST00000493886 VTI1AQ96AJ9 217 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 IFT74Q96LB3 600 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 POLR3FQ9H1D9 316 aaPredicted RBP14.87□□□□□ -0.03
VCP-207ENST00000493886 FAM153AQ9UHL3 310 aa14.87□□□□□ -0.03
VCP-207ENST00000493886 KIF1CO43896 1103 aaKnown RBP14.86□□□□□ -0.03
VCP-207ENST00000493886 ATG7O95352 703 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 TNFAIP3P21580 790 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 IREB2P48200 963 aaKnown RBP14.86□□□□□ -0.03
VCP-207ENST00000493886 CCT5P48643 541 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 RPS6KA1Q15418 735 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 PARD3BQ8TEW8 1205 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 CCDC127Q96BQ5 260 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 KRT12Q99456 494 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 SPATC1LQ9H0A9 340 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 ELP3Q9H9T3 547 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 ZNF302Q9NR11 478 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 A0A0G2JMZ2 1700 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 SYNGAP1Q96PV0 1343 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 TMCO5BA8MYB1 307 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 HEXIM1O94992 359 aaKnown RBP14.86□□□□□ -0.03
VCP-207ENST00000493886 ATP4AP20648 1035 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 KLHL7Q8IXQ5 586 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 POMGNT1Q8WZA1 660 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 TAF4BQ92750 862 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 FBXL18Q96ME1 805 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 EPB41L5Q9HCM4 733 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 MAFBQ9Y5Q3 323 aaPredicted RBP14.86□□□□□ -0.03
VCP-207ENST00000493886 PPFIA4O75335 1185 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 KIF4AO95239 1232 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 NCAPG2Q86XI2 1143 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 LMBR1Q8WVP7 490 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 OTUD5Q96G74 571 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 FHDC1Q9C0D6 1143 aaPredicted RBP14.86□□□□□ -0.03
VCP-207ENST00000493886 ARHGAP28Q9P2N2 729 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 USP20Q9Y2K6 914 aa14.86□□□□□ -0.03
VCP-207ENST00000493886 A0A0G2JLL6 359 aaPredicted RBP14.85□□□□□ -0.03
VCP-207ENST00000493886 HNRNPDLO14979 420 aaKnown RBP14.85□□□□□ -0.03
VCP-207ENST00000493886 RPS6KA5O75582 802 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 EPHB4P54760 987 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 GNGT1P63211 74 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 EMC2Q15006 297 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 BRDTQ58F21 947 aaPredicted RBP14.85□□□□□ -0.03
VCP-207ENST00000493886 TTMPQ5BVD1 217 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 TAS1R3Q7RTX0 852 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 PRRT2Q7Z6L0 340 aaPredicted RBP14.85□□□□□ -0.03
VCP-207ENST00000493886 SPON1Q9HCB6 807 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 SEPT11Q9NVA2 429 aaKnown RBP14.85□□□□□ -0.03
VCP-207ENST00000493886 OATP04181 439 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 TMEM253P0C7T8 217 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 POLGP54098 1239 aaPredicted RBP14.85□□□□□ -0.03
VCP-207ENST00000493886 PPATQ06203 517 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 KRT39Q6A163 491 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 RPAINQ86UA6 219 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 TMC2Q8TDI7 906 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 UPF1Q92900 1129 aaKnown RBP eCLIP14.85□□□□□ -0.037e-23■■■■■ 49.1
VCP-207ENST00000493886 KAT5Q92993 513 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 BICD1Q96G01 975 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 MFSD14AQ96MC6 490 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 ZIM3Q96PE6 472 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 AGPAT1Q99943 283 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 PAGR1Q9BTK6 254 aa14.85□□□□□ -0.03
VCP-207ENST00000493886 NCANO14594 1321 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 SOWAHBA6NEL2 793 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 H0YCG3 227 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 KCNK3O14649 394 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 PPP1R12AO14974 1030 aaPredicted RBP14.84□□□□□ -0.03
VCP-207ENST00000493886 UBA1P22314 1058 aaKnown RBP14.84□□□□□ -0.03
VCP-207ENST00000493886 EDNRBP24530 442 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 PDCLQ13371 301 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 SLFN11Q7Z7L1 901 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 PALB2Q86YC2 1186 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 RUBCNQ92622 972 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 SEMA4DQ92854 862 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 CLMNQ96JQ2 1002 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 POP1Q99575 1024 aaKnown RBP14.84□□□□□ -0.03
VCP-207ENST00000493886 TMEM8AQ9HCN3 771 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 CES2O00748 559 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 HSF2BPO75031 334 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 GARTP22102 1010 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 IRAK1P51617 712 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 CYP24A1Q07973 514 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 ERO1BQ86YB8 467 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms