RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 SPIRE2Q8WWL2 714 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 COPS5Q92905 334 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 ZHX3Q9H4I2 956 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 DHX33Q9H6R0 707 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 MRPL44Q9H9J2 332 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 FANCLQ9NW38 375 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 FAM184BQ9ULE4 1060 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 KAT6AQ92794 2004 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 A6NNZ2 444 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 H0YCG3 227 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 HBP1O60381 514 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 SORBS3O60504 671 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 SMNDC1O75940 238 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 NPEPPSP55786 919 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 STX17P56962 302 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 PPP2R3AQ06190 1150 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 NFIL3Q16649 462 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 EDRF1Q3B7T1 1238 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 TUBB8Q3ZCM7 444 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 ZCWPW2Q504Y3 356 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 SFMBT2Q5VUG0 894 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 FAM178BQ8IXR5 827 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 ZC3H3Q8IXZ2 948 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 SCFD1Q8WVM8 642 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 GLG1Q92896 1179 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 HPS3Q969F9 1004 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 RBM41Q96IZ5 413 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 CTAGE1Q96RT6 745 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 FIZ1Q96SL8 496 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 DUSP9Q99956 384 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 STRA6Q9BX79 667 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 TRIM4Q9C037 500 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 SEMA6BQ9H3T3 888 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 ERAP1Q9NZ08 941 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 L1RE1Q9UN81 338 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 MAPK8IP1Q9UQF2 711 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 GNEQ9Y223 722 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 PCDHB13Q9Y5F0 798 aa7.83□□□□□ -1.16
SMARCE1-211ENST00000493660 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 MEFVO15553 781 aaPredicted RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 PPP1R37O75864 691 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 GCNT3O95395 438 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 LGALS2P05162 132 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 MMP3P08254 477 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 EEF1GP26641 437 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 NCKAP1LP55160 1127 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 PRMT2P55345 433 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 SNRPFP62306 86 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 FANCCQ00597 558 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 EMC2Q15006 297 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 CCL14Q16627 93 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 KNOP1Q1ED39 458 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 MTERF2Q49AM1 385 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 CCDC40Q4G0X9 1142 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 ZNF484Q5JVG2 852 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 ODR4Q5SWX8 454 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 ZNF720Q7Z2F6 126 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 PIP4P2Q8N4L2 257 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 CEP63Q96MT8 703 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 GORASP1Q9BQQ3 440 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 KCTD10Q9H3F6 313 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 TYW1Q9NV66 732 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 LIMA1Q9UHB6 759 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 TRAF3IP3Q9Y228 551 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 FRMPD3Q5JV73 1810 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 TMEM150BA6NC51 233 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 GOLGA6L9A6NEM1 432 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 A6NJR5 290 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 PDXKO00764 312 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 CALUO43852 315 aaPredicted RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 ZEB2O60315 1214 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 MAFO75444 373 aaPredicted RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 E2F6O75461 281 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 RNF8O76064 485 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 CYBAP13498 195 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 AKR1A1P14550 325 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 FLT3LGP49771 235 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 POLGP54098 1239 aaPredicted RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 PMS1P54277 932 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 NKX3-2P78367 333 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 DGKDQ16760 1214 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 TSNAXIP1Q2TAA8 658 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 THEMIS2Q5TEJ8 643 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 ANKRD40Q6AI12 368 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 CEP57Q86XR8 500 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 PARP9Q8IXQ6 854 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 CSGALNACT2Q8N6G5 542 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 MSANTD4Q8NCY6 345 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 HDAC7Q8WUI4 952 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 TMEM174Q8WUU8 243 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 AFG1LQ8WV93 481 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 SLC7A3Q8WY07 619 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 NTPCRQ9BSD7 190 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 ARHGAP39Q9C0H5 1083 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 TRPV5Q9NQA5 729 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 XPNPEP1Q9NQW7 623 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 SAMSN1Q9NSI8 373 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 TBC1D7Q9P0N9 293 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 MAGEC2Q9UBF1 373 aaPredicted RBP7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 SRRDQ9UH36 339 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms