RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 THG1LQ9NWX6 298 aaKnown RBP4.63□□□□□ -1.67
PTCD3-218ENST00000493430 EIF2B4Q9UI10 523 aaKnown RBP4.63□□□□□ -1.67
PTCD3-218ENST00000493430 MSRAQ9UJ68 235 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 USP18Q9UMW8 372 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.63□□□□□ -1.67
PTCD3-218ENST00000493430 CFAP74Q9C0B2 1584 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 C3P01024 1663 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 B3GALT2O43825 422 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 NRP2O60462 931 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 POU3F2P20265 443 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-218ENST00000493430 PROZP22891 400 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 ADRA1BP35368 520 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 GPR15P49685 360 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 GZMKP49863 264 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 KPNA1P52294 538 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-218ENST00000493430 DSG1Q02413 1049 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 DUSP2Q05923 314 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 KRTAP1-1Q07627 177 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 VPS72Q15906 364 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 CCDC178Q5BJE1 867 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 GPR158Q5T848 1215 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 TAS1R1Q7RTX1 841 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 CXorf67Q86X51 503 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-218ENST00000493430 OR52N2Q8NGI0 321 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 GPR150Q8NGU9 434 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 GAB3Q8WWW8 586 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 MTFR1LQ9H019 292 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.62□□□□□ -1.67
PTCD3-218ENST00000493430 HS3ST4Q9Y661 456 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 KIDINS220Q9ULH0 1771 aa4.62□□□□□ -1.67
PTCD3-218ENST00000493430 SAMD9LQ8IVG5 1584 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 CLTCQ00610 1675 aaKnown RBP4.61□□□□□ -1.67
PTCD3-218ENST00000493430 CEP152O94986 1710 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 ZNF891A8MT65 544 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-218ENST00000493430 TGM5O43548 720 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 SEC24DO94855 1032 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-218ENST00000493430 CFBP00751 764 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 LMNAP02545 664 aaKnown RBP4.61□□□□□ -1.67
PTCD3-218ENST00000493430 PFKMP08237 780 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 NRG3P56975 720 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 TAP1Q03518 808 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 SART3Q15020 963 aaKnown RBP4.61□□□□□ -1.67
PTCD3-218ENST00000493430 LMBR1LQ6UX01 489 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 DOK3Q7L591 496 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 LRRTM3Q86VH5 581 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 NDC1Q9BTX1 674 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 SLC46A2Q9BY10 475 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 CPEB1Q9BZB8 566 aaKnown RBP4.61□□□□□ -1.67
PTCD3-218ENST00000493430 CLCA2Q9UQC9 943 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 COL4A3Q01955 1670 aa4.61□□□□□ -1.67
PTCD3-218ENST00000493430 MYO5BQ9ULV0 1848 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 AHRRA9YTQ3 701 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 NUDT3O95989 172 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 HSP90B1P14625 803 aaKnown RBP4.6□□□□□ -1.67
PTCD3-218ENST00000493430 LSP1P33241 339 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 SCNN1BP51168 640 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 OCRLQ01968 901 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 C21orf62-AS1Q17RA5 79 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 CCDC144BQ3MJ40 725 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 ZBTB41Q5SVQ8 909 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 CNNM4Q6P4Q7 775 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 HOMER1Q86YM7 354 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 ZNF610Q8N9Z0 462 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 MYEOVQ96EZ4 313 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 DCLRE1CQ96SD1 692 aaKnown RBP4.6□□□□□ -1.67
PTCD3-218ENST00000493430 FDXACB1Q9BRP7 624 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-218ENST00000493430 LSM14BQ9BX40 385 aaKnown RBP4.6□□□□□ -1.67
PTCD3-218ENST00000493430 ZNF768Q9H5H4 540 aaKnown RBP4.6□□□□□ -1.67
PTCD3-218ENST00000493430 RIOX1Q9H6W3 641 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 CYP4F11Q9HBI6 524 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 ZNHIT2Q9UHR6 403 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 KCNG1Q9UIX4 513 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 CD2APQ9Y5K6 639 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 NUMBLQ9Y6R0 609 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 DIP2CQ9Y2E4 1556 aa4.6□□□□□ -1.67
PTCD3-218ENST00000493430 A0A1W2PR48 441 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 PRSS38A1L453 326 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 GRID2IPA4D2P6 1211 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 PRR5-ARHGAP8B1AHC4 643 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 CROCC2H7BZ55 1655 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 RNASET2O00584 256 aaKnown RBP4.59□□□□□ -1.67
PTCD3-218ENST00000493430 ZFP36P26651 326 aaKnown RBP4.59□□□□□ -1.67
PTCD3-218ENST00000493430 APOBEC3AP31941 199 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-218ENST00000493430 PTTG1IPP53801 180 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 PHC1P78364 1004 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 MGAT5Q09328 741 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 TIAM1Q13009 1591 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 UBE3CQ15386 1083 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 CD109Q6YHK3 1445 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 TEX14Q8IWB6 1497 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 AHI1Q8N157 1196 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 MSL3Q8N5Y2 521 aaKnown RBP4.59□□□□□ -1.67
PTCD3-218ENST00000493430 SMC1BQ8NDV3 1235 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 RSAD2Q8WXG1 361 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 NINJ1Q92982 152 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 RNPC3Q96LT9 517 aaKnown RBP4.59□□□□□ -1.67
PTCD3-218ENST00000493430 GPR101Q96P66 508 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-218ENST00000493430 WNT8AQ9H1J5 351 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 TOR3AQ9H497 397 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms