RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 PRKCBP05771 671 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 SCNN1GP51170 649 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 CUL4AQ13619 759 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 PTPN14Q15678 1187 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 HERC4Q5GLZ8 1057 aaPredicted RBP12.68□□□□□ -0.38
LRTM1-202ENST00000493075 LLGL2Q6P1M3 1020 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 RNF135Q8IUD6 432 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 GPR65Q8IYL9 337 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 RNF168Q8IYW5 571 aaPredicted RBP12.68□□□□□ -0.38
LRTM1-202ENST00000493075 SLC22A17Q8WUG5 538 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 ZFP42Q96MM3 310 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 MMTAG2Q9BU76 263 aaKnown RBP12.68□□□□□ -0.38
LRTM1-202ENST00000493075 TIPINQ9BVW5 301 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 COLEC11Q9BWP8 271 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 EMILIN2Q9BXX0 1053 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 ADAM7Q9H2U9 754 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 PDZD7Q9H5P4 517 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 C17orf75Q9HAS0 396 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 MRPL17Q9NRX2 175 aaKnown RBP12.68□□□□□ -0.38
LRTM1-202ENST00000493075 DZANK1Q9NVP4 752 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 MARCH5Q9NX47 278 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 KCNG1Q9UIX4 513 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 ARIH1Q9Y4X5 557 aaPredicted RBP12.68□□□□□ -0.38
LRTM1-202ENST00000493075 NCOR1O75376 2440 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 PHLPP2Q6ZVD8 1323 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 PP2D1A8MPX8 630 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 PRR33A8MZF0 331 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 E9PMD0 336 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 C1RP00736 705 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 AKAP5P24588 427 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 CDC25AP30304 524 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 CA8P35219 290 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 OR1G1P47890 313 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 GRIK3Q13003 919 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 CES5AQ6NT32 575 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 RINT1Q6NUQ1 792 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 C1orf186Q6ZWK4 172 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 CDR2LQ86X02 465 aaPredicted RBP12.67□□□□□ -0.38
LRTM1-202ENST00000493075 AUTS2Q8WXX7 1259 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 NECTIN4Q96NY8 510 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 KLHL5Q96PQ7 755 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 ADPGKQ9BRR6 497 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 NTPCRQ9BSD7 190 aaKnown RBP12.67□□□□□ -0.38
LRTM1-202ENST00000493075 HERC2P3Q9BVR0 1158 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 APOL6Q9BWW8 343 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 NT5C3AQ9H0P0 336 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 RBM19Q9Y4C8 960 aaKnown RBP12.67□□□□□ -0.38
LRTM1-202ENST00000493075 PLXNA4Q9HCM2 1894 aa12.67□□□□□ -0.38
LRTM1-202ENST00000493075 TTLL13PA6NNM8 815 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 K7ERI5 159 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 BMP15O95972 392 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 CNPP09543 421 aaKnown RBP12.66□□□□□ -0.38
LRTM1-202ENST00000493075 GUCY2CP25092 1073 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 TMEM132AQ24JP5 1023 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 DCAF4L1Q3SXM0 396 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 NT5DC1Q5TFE4 455 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 KIAA0319Q5VV43 1072 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 BRAPQ7Z569 592 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 APBB1IPQ7Z5R6 666 aaPredicted RBP12.66□□□□□ -0.38
LRTM1-202ENST00000493075 SYT2Q8N9I0 419 aaPredicted RBP12.66□□□□□ -0.38
LRTM1-202ENST00000493075 AK8Q96MA6 479 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 DRC1Q96MC2 740 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 RPS6KC1Q96S38 1066 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 RXFP1Q9HBX9 757 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 POLD4Q9HCU8 107 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 CHST7Q9NS84 486 aa12.66□□□□□ -0.38
LRTM1-202ENST00000493075 PRG3Q9Y2Y8 225 aaPredicted RBP12.66□□□□□ -0.38
LRTM1-202ENST00000493075 VWA3AA6NCI4 1184 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 URODP06132 367 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 PDCP20941 246 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 KLRC2P26717 231 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 MTHFRP42898 656 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 NPTX2P47972 431 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 CLCN4P51793 760 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 PEX3P56589 373 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 DSG1Q02413 1049 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 DMP1Q13316 513 aaPredicted RBP12.65□□□□□ -0.38
LRTM1-202ENST00000493075 ATAT1Q5SQI0 421 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 ATF7IP2Q5U623 682 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 TAS1R1Q7RTX1 841 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 KCNK18Q7Z418 384 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 DAW1Q8N136 415 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 EDAQ92838 391 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 RPGRIP1Q96KN7 1286 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 RIPOR3Q96MK2 946 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 PNMA5Q96PV4 448 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 RUSC1Q9BVN2 902 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 BACH2Q9BYV9 841 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 SNTG2Q9NY99 539 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 KCND2Q9NZV8 630 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 KLK14Q9P0G3 267 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 TNFSF13BQ9Y275 285 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 ATG2AQ2TAZ0 1938 aa12.65□□□□□ -0.38
LRTM1-202ENST00000493075 CCDC169A6NNP5 214 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 HIP1RO75146 1068 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 TADA2AO75478 443 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 EDN1P05305 212 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 THP07101 528 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms