RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 C1orf141Q5JVX7 400 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 FDX2Q6P4F2 183 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 KLC3Q6P597 504 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 IYDQ6PHW0 289 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 CLEC2AQ6UVW9 174 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 HHIPL2Q6UWX4 724 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 ZYG11AQ6WRX3 759 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 ZNF771Q7L3S4 317 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 HOOK3Q86VS8 718 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 PTRH1Q86Y79 214 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 HID1Q8IV36 788 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 AHI1Q8N157 1196 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 FAM71DQ8N9W8 422 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 SMYD1Q8NB12 490 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 KCNH5Q8NCM2 988 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 Q8NFD4 153 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 OR6P1Q8NGX9 317 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 LILRB4Q8NHJ6 448 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 NPLOC4Q8TAT6 608 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 GDAP1Q8TB36 358 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 NANOS1Q8WY41 292 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 NKD1Q969G9 470 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 SDCCAG3Q96C92 435 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 INTS12Q96CB8 462 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 ZC3H10Q96K80 434 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 ATP6V1G3Q96LB4 118 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 AK8Q96MA6 479 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 CCDC43Q96MW1 224 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 NUP88Q99567 741 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 DDX50Q9BQ39 737 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 BCL7BQ9BQE9 202 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 GCOM2Q9BZD3 368 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 VTA1Q9NP79 307 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 TOMM22Q9NS69 142 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 NMRK1Q9NWW6 199 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 ITGB1BP2Q9UKP3 347 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 TRIM33Q9UPN9 1127 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 C15orf41Q9Y2V0 281 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 AATKQ6ZMQ8 1374 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 LRRIQ4A6NIV6 560 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 GOLGA8AA7E2F4 631 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 GOLGA8BA8MQT2 603 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 E2F3O00716 465 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 DYNC1I1O14576 645 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ASAP2O43150 1006 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 NCK2O43639 380 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ZEB2O60315 1214 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 NPTXRO95502 500 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 HRGP04196 525 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 PYGMP11217 842 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ACTN1P12814 892 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 SMPD1P17405 629 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 POU3F2P20265 443 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 RPL13P26373 211 aaKnown RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 NF2P35240 595 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 CPT1AP50416 773 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 CACNB3P54284 484 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ARL4CP56559 192 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ERVK-21P61565 698 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 NRG1Q02297 640 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 EXOSC9Q06265 439 aaKnown RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 TBC1D8BQ0IIM8 1120 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 GPS2Q13227 327 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 PWP1Q13610 501 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 BMPR2Q13873 1038 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ERV3-1Q14264 604 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 CRY1Q16526 586 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 LINC01559Q495D7 138 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 CCDC14Q49A88 953 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 TCTE1Q5JU00 501 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 KCNT1Q5JUK3 1230 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 COX20Q5RI15 118 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 IFIT1BQ5T764 474 aaKnown RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 DRICH1Q6PGQ1 229 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 RFX8Q6ZV50 586 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 MAMDC2Q7Z304 686 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 MRPL10Q7Z7H8 261 aaKnown RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 DPP9Q86TI2 863 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 WDR49Q8IV35 697 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 P3H2Q8IVL5 708 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 NKAIN4Q8IVV8 208 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 SLITRK4Q8IW52 837 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 FAM178BQ8IXR5 827 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 SCYL3Q8IZE3 742 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 RNF10Q8N5U6 811 aaKnown RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 RBBP8NLQ8NC74 664 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ZBTB34Q8NCN2 500 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 GMCL1P1Q8NEA9 526 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ANKRD20A12PQ8NF67 263 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 HSPH1Q92598 858 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 OSBP2Q969R2 916 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 NCLNQ969V3 563 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 RHOVQ96L33 236 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 LENG8Q96PV6 779 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 NUDCD1Q96RS6 583 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ACO2Q99798 780 aaKnown RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 CORO1BQ9BR76 489 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 HGH1Q9BTY7 390 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 IFT22Q9H7X7 185 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 IARS2Q9NSE4 1012 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms