RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 DCAF15Q66K64 600 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 CYFIP1Q7L576 1253 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 EPS8L1Q8TE68 723 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 NSUN6Q8TEA1 469 aaKnown RBP13.86□□□□□ -0.19
PRAME-213ENST00000492657 ZNF526Q8TF50 670 aaPredicted RBP13.86□□□□□ -0.19
PRAME-213ENST00000492657 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 GPRASP2Q96D09 838 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 BTBD6Q96KE9 485 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 TRIM31Q9BZY9 425 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 GINM1Q9NU53 330 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 CYP39A1Q9NYL5 469 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 NOCTQ9UK39 431 aaKnown RBP13.86□□□□□ -0.19
PRAME-213ENST00000492657 P4HA2O15460 535 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 ERLIN2O94905 339 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 ATP1A2P50993 1020 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 GNGT1P63211 74 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 PPFIA1Q13136 1202 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 LMBRD2Q68DH5 695 aaPredicted RBP13.86□□□□□ -0.19
PRAME-213ENST00000492657 KCNV1Q6PIU1 500 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 FAM71AQ8IYT1 594 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 BCAS4Q8TDM0 211 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 TMEM174Q8WUU8 243 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 CALR3Q96L12 384 aaKnown RBP13.86□□□□□ -0.19
PRAME-213ENST00000492657 TRIM51Q9BSJ1 452 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 DPH5Q9H2P9 285 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 ERVK-5Q9HDB9 667 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 FAM169AQ9Y6X4 670 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 POLR2AP24928 1970 aaKnown RBP13.85□□□□□ -0.19
PRAME-213ENST00000492657 GOLGA8KD6RF30 607 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 MYO1FO00160 1098 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 RFX1P22670 979 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 ACTR2P61160 394 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 PRKCEQ02156 737 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 MESDQ14696 234 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 TAS1R3Q7RTX0 852 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 SAMD3Q8N6K7 520 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 HELQQ8TDG4 1101 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 RNPC3Q96LT9 517 aaKnown RBP13.85□□□□□ -0.19
PRAME-213ENST00000492657 IWS1Q96ST2 819 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 TIPINQ9BVW5 301 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 JPH1Q9HDC5 661 aaPredicted RBP13.85□□□□□ -0.19
PRAME-213ENST00000492657 EXOC7Q9UPT5 735 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 MYH9P35579 1960 aaKnown RBP13.85□□□□□ -0.19
PRAME-213ENST00000492657 FZD9O00144 591 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 SHOX2O60902 331 aaPredicted RBP13.85□□□□□ -0.19
PRAME-213ENST00000492657 MTERF2Q49AM1 385 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 KRT39Q6A163 491 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 OTUD6AQ7L8S5 288 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 OR2W6PQ8NHA6 318 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 NCAPGQ9BPX3 1015 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 FAM213AQ9BRX8 229 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 AS3MTQ9HBK9 375 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 ADAMTS5Q9UNA0 930 aa13.85□□□□□ -0.19
PRAME-213ENST00000492657 DOCK1Q14185 1865 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 HNRNPDLO14979 420 aaKnown RBP13.84□□□□□ -0.19
PRAME-213ENST00000492657 WNT7BP56706 349 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 GPC5P78333 572 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 FMO1Q01740 532 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 CNTN2Q02246 1040 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 CATSPERGQ6ZRH7 1159 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 SV2AQ7L0J3 742 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 WHAMMQ8TF30 809 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 GLG1Q92896 1179 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 TMEM143Q96AN5 459 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 PDLIM7Q9NR12 457 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 GEMIN8Q9NWZ8 242 aaKnown RBP13.84□□□□□ -0.19
PRAME-213ENST00000492657 SLC9A2Q9UBY0 812 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 MAPK13O15264 365 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 PSAPP07602 524 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 FDX1P10109 184 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 LLGL1Q15334 1064 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 UAP1Q16222 522 aaPredicted RBP13.84□□□□□ -0.19
PRAME-213ENST00000492657 EFCAB13Q8IY85 973 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 SHC3Q92529 594 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 KIFAP3Q92845 792 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 ATP6V0A1Q93050 837 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 FAM212AQ96EL1 285 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 BICD1Q96G01 975 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 MYCBPQ99417 103 aaPredicted RBP13.84□□□□□ -0.19
PRAME-213ENST00000492657 NTPCRQ9BSD7 190 aaKnown RBP13.84□□□□□ -0.19
PRAME-213ENST00000492657 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 PLAAQ9Y263 795 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 PHIPQ8WWQ0 1821 aa13.84□□□□□ -0.19
PRAME-213ENST00000492657 BHMG1C9JSJ3 638 aaPredicted RBP13.83□□□□□ -0.19
PRAME-213ENST00000492657 CCDC188H7C350 402 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 ATP4AP20648 1035 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 COMTP21964 271 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 MFAP3P55082 362 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 POU5F1Q01860 360 aaKnown RBP13.83□□□□□ -0.19
PRAME-213ENST00000492657 CYP24A1Q07973 514 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 PDCLQ13371 301 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 XRRA1Q6P2D8 792 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 ABHD15Q6UXT9 468 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 PHLDB2Q86SQ0 1253 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 MREGQ8N565 214 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 SPIRE2Q8WWL2 714 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 ZNF516Q92618 1163 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 KLRG1Q96E93 195 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 MFSD14AQ96MC6 490 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms