RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 IFT74Q96LB3 600 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 USP28Q96RU2 1077 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 GPRC5CQ9NQ84 441 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 DAXXQ9UER7 740 aaPredicted RBP16.21■□□□□ 0.19
SS18L1-205ENST00000492466 INPP5FQ9Y2H2 1132 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 CACNA1HO95180 2353 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 LILRB3O75022 631 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 WEE2P0C1S8 567 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 EPCAMP16422 314 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 LIG1P18858 919 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 SP100P23497 879 aaPredicted RBP16.2■□□□□ 0.18
SS18L1-205ENST00000492466 ITIH3Q06033 890 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 CAPSQ13938 189 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 PPP2R5AQ15172 486 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 TPRNQ4KMQ1 711 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 C12orf76Q8N812 135 aaPredicted RBP16.2■□□□□ 0.18
SS18L1-205ENST00000492466 SMG8Q8ND04 991 aaKnown RBP16.2■□□□□ 0.18
SS18L1-205ENST00000492466 ASAP3Q8TDY4 903 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 KMT2EQ8IZD2 1858 aa16.2■□□□□ 0.18
SS18L1-205ENST00000492466 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.19■□□□□ 0.18
SS18L1-205ENST00000492466 C2CD4DB7Z1M9 353 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 EFEMP2O95967 443 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 KRT18P05783 430 aaKnown RBP16.19■□□□□ 0.18
SS18L1-205ENST00000492466 CYP11B2P19099 503 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 NCLP19338 710 aaKnown RBP16.19■□□□□ 0.18
SS18L1-205ENST00000492466 MRE11P49959 708 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 DHX8Q14562 1220 aaKnown RBP16.19■□□□□ 0.18
SS18L1-205ENST00000492466 PTPN14Q15678 1187 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 FBXL6Q8N531 539 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 DEPTORQ8TB45 409 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 KIFAP3Q92845 792 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 PGBD4Q96DM1 585 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 NECTIN4Q96NY8 510 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 MMTAG2Q9BU76 263 aaKnown RBP16.19■□□□□ 0.18
SS18L1-205ENST00000492466 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
SS18L1-205ENST00000492466 CARNS1A5YM72 827 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 INPPL1O15357 1258 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 SLC26A4O43511 780 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 GLRA2P23416 452 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 ARL2P36404 184 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 VCPP55072 806 aaKnown RBP16.18■□□□□ 0.18
SS18L1-205ENST00000492466 PTENP60484 403 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 RNASELQ05823 741 aaKnown RBP16.18■□□□□ 0.18
SS18L1-205ENST00000492466 TCF15Q12870 199 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 GIT2Q14161 759 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 KARSQ15046 597 aaKnown RBP16.18■□□□□ 0.18
SS18L1-205ENST00000492466 PTPAQ15257 358 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 AMHR2Q16671 573 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 CES5AQ6NT32 575 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 IFNLR1Q8IU57 520 aaPredicted RBP16.18■□□□□ 0.18
SS18L1-205ENST00000492466 KRI1Q8N9T8 703 aaKnown RBP16.18■□□□□ 0.18
SS18L1-205ENST00000492466 DRC1Q96MC2 740 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 PHOX2BQ99453 314 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 GBP3Q9H0R5 595 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 CSRNP2Q9H175 543 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 C2orf40Q9H1Z8 148 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 RSAD1Q9HA92 442 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 TFIP11Q9UBB9 837 aaKnown RBP16.18■□□□□ 0.18
SS18L1-205ENST00000492466 CNTNAP2Q9UHC6 1331 aa16.18■□□□□ 0.18
SS18L1-205ENST00000492466 NRP1O14786 923 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 TSPAN1O60635 241 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 PDGFBP01127 241 aaPredicted RBP16.17■□□□□ 0.18
SS18L1-205ENST00000492466 PLCG1P19174 1290 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 GRIN1Q05586 938 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 RAD51AP2Q09MP3 1159 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 DMP1Q13316 513 aaPredicted RBP16.17■□□□□ 0.18
SS18L1-205ENST00000492466 TMEM119Q4V9L6 283 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 SPECC1Q5M775 1068 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 RARS2Q5T160 578 aaKnown RBP16.17■□□□□ 0.18
SS18L1-205ENST00000492466 KIAA1841Q6NSI8 718 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 KREMEN2Q8NCW0 462 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 TMEM175Q9BSA9 504 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 EIF2AQ9BY44 585 aaKnown RBP16.17■□□□□ 0.18
SS18L1-205ENST00000492466 TRIM6Q9C030 488 aaPredicted RBP16.17■□□□□ 0.18
SS18L1-205ENST00000492466 TSHZ2Q9NRE2 1034 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 DZANK1Q9NVP4 752 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 MARCH5Q9NX47 278 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 MIOSQ9NXC5 875 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 FBXO2Q9UK22 296 aaPredicted RBP16.17■□□□□ 0.18
SS18L1-205ENST00000492466 NR2E1Q9Y466 385 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 IPPQ9Y573 584 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 SRPRBQ9Y5M8 271 aaKnown RBP16.17■□□□□ 0.18
SS18L1-205ENST00000492466 WDR87Q6ZQQ6 2873 aa16.17■□□□□ 0.18
SS18L1-205ENST00000492466 CCDC169A6NNP5 214 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 SPTLC2O15270 562 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 HIP1RO75146 1068 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 BRD1O95696 1058 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 POMCP01189 267 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 ALDH2P05091 517 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 CNPP09543 421 aaKnown RBP16.16■□□□□ 0.18
SS18L1-205ENST00000492466 PLA2G4BP0C869 781 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 MTHFRP42898 656 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 NAMPTP43490 491 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 NASPP49321 788 aaPredicted RBP16.16■□□□□ 0.18
SS18L1-205ENST00000492466 CLCN4P51793 760 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 POU5F1BQ06416 359 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 PKP1Q13835 747 aa16.16■□□□□ 0.18
SS18L1-205ENST00000492466 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
SS18L1-205ENST00000492466 SLC39A14Q15043 492 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms