RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 TWF2Q6IBS0 349 aaKnown RBP16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 TMC7Q7Z402 723 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 IQUBQ8NA54 791 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 KIFAP3Q92845 792 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 TMEM143Q96AN5 459 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 RUSC1Q9BVN2 902 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 MAGEF1Q9HAY2 307 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 AGPAT5Q9NUQ2 364 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 TBC1D13Q9NVG8 400 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 KCNH3Q9ULD8 1083 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 HCFC2Q9Y5Z7 792 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 B4GALT3O60512 393 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 SRGAP2BP0DMP2 458 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 PFKFB1P16118 471 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 HOXB8P17481 243 aaPredicted RBP16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 POU5F1BQ06416 359 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 LAMTOR4Q0VGL1 99 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 SMC1AQ14683 1233 aaKnown RBP16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 LLGL2Q6P1M3 1020 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 CATSPER4Q7RTX7 472 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 BMP8AQ7Z5Y6 402 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 BCL7CQ8WUZ0 217 aaPredicted RBP16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 PRPF31Q8WWY3 499 aaKnown RBP16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 RPGRIP1Q96KN7 1286 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 DRC1Q96MC2 740 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 NFKBIZQ9BYH8 718 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 ZBP1Q9H171 429 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 POLR3FQ9H1D9 316 aaPredicted RBP16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 KCNH6Q9H252 994 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 TNMDQ9H2S6 317 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 MINDY3Q9H8M7 445 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 CDH22Q9UJ99 828 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 ODF2LQ9ULJ1 636 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 PIEZO1Q92508 2521 aa16.56■□□□□ 0.24
CDC42SE1-205ENST00000491825 ZC3H11AO75152 810 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 OFD1O75665 1012 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 SSBP05455 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 SKIP12755 728 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 GLRA2P23416 452 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 HOXA11P31270 313 aaPredicted RBP16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 ALDH7A1P49419 539 aaKnown RBP16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 ZXDAP98168 799 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 MAPK7Q13164 816 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 MCM6Q14566 821 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 LONRF3Q496Y0 759 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 ARSHQ5FYA8 562 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 NOMO2Q5JPE7 1267 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 GLB1LQ6UWU2 654 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 AGMOQ6ZNB7 445 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 TRIM67Q6ZTA4 783 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 GPBP1Q86WP2 473 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 IFNLR1Q8IU57 520 aaPredicted RBP16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 DAW1Q8N136 415 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 PDILTQ8N807 584 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 TMEM169Q96HH4 297 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 IGSF21Q96ID5 467 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 NRDE2Q9H7Z3 1164 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 C17orf75Q9HAS0 396 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 GPRC5CQ9NQ84 441 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 KBTBD4Q9NVX7 518 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 USP25Q9UHP3 1055 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 IRAK3Q9Y616 596 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 ZNF318Q5VUA4 2279 aa16.55■□□□□ 0.24
CDC42SE1-205ENST00000491825 A0A1B0GVL5 298 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 POLR2DO15514 142 aaKnown RBP16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 CLASP2O75122 1294 aaKnown RBP16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 GALTP07902 379 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 CAPSQ13938 189 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 TFDP1Q14186 410 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 PPP2R5AQ15172 486 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 UBXN11Q5T124 520 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 SV2BQ7L1I2 683 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 SRGAP1Q7Z6B7 1085 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 MRPL10Q7Z7H8 261 aaKnown RBP16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 ASAP3Q8TDY4 903 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 CASP10Q92851 521 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 DHX58Q96C10 678 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 FBXL18Q96ME1 805 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 APOL5Q9BWW9 433 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 VN1R3Q9BXE9 311 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 DNAJB4Q9UDY4 337 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 PCDHB2Q9Y5E7 798 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 MYH11P35749 1972 aa16.54■□□□□ 0.24
CDC42SE1-205ENST00000491825 CARNS1A5YM72 827 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 GOLGA6L4A6NEF3 574 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 TMEM221A6NGB7 291 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 M0R296 226 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 HIP1RO75146 1068 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 CTSAP10619 480 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 NAMPTP43490 491 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 NDUFA8P51970 172 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 ZNF131P52739 623 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 PCBP1Q15365 356 aaKnown RBP eCLIP16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 CDCA2Q69YH5 1023 aaPredicted RBP16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 CNNM4Q6P4Q7 775 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 MAEAQ7L5Y9 396 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 DDX53Q86TM3 631 aaKnown RBP16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 VPS52Q8N1B4 723 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 FSIP1Q8NA03 581 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 RNF149Q8NC42 400 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms