RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 SKIP12755 728 aa15.04■□□□□ -0
CDK9-204ENST00000491521 BCAR1P56945 870 aa15.04■□□□□ -0
CDK9-204ENST00000491521 KRT17Q04695 432 aa15.04■□□□□ -0
CDK9-204ENST00000491521 GLB1LQ6UWU2 654 aa15.04■□□□□ -0
CDK9-204ENST00000491521 TMC7Q7Z402 723 aa15.04■□□□□ -0
CDK9-204ENST00000491521 SRGAP1Q7Z6B7 1085 aa15.04■□□□□ -0
CDK9-204ENST00000491521 ASAP3Q8TDY4 903 aa15.04■□□□□ -0
CDK9-204ENST00000491521 LRRC15Q8TF66 581 aa15.04■□□□□ -0
CDK9-204ENST00000491521 MRPL9Q9BYD2 267 aaKnown RBP15.04■□□□□ -0
CDK9-204ENST00000491521 TMEM63CQ9P1W3 806 aa15.04■□□□□ -0
CDK9-204ENST00000491521 DBR1Q9UK59 544 aaKnown RBP15.04■□□□□ -0
CDK9-204ENST00000491521 PCDHB2Q9Y5E7 798 aa15.04■□□□□ -0
CDK9-204ENST00000491521 HIDE1A8MVS5 230 aa15.03■□□□□ -0
CDK9-204ENST00000491521 INO80B-WBP1J3KQ70 363 aa15.03■□□□□ -0
CDK9-204ENST00000491521 ASAP2O43150 1006 aa15.03■□□□□ -0
CDK9-204ENST00000491521 MBTPS2O43462 519 aa15.03■□□□□ -0
CDK9-204ENST00000491521 GLP2RO95838 553 aa15.03■□□□□ -0
CDK9-204ENST00000491521 COL9A1P20849 921 aa15.03■□□□□ -0
CDK9-204ENST00000491521 PPM1AP35813 382 aa15.03■□□□□ -0
CDK9-204ENST00000491521 ALDH7A1P49419 539 aaKnown RBP15.03■□□□□ -0
CDK9-204ENST00000491521 RAB27AP51159 221 aa15.03■□□□□ -0
CDK9-204ENST00000491521 PLCB3Q01970 1234 aa15.03■□□□□ -0
CDK9-204ENST00000491521 SMAD4Q13485 552 aaKnown RBP15.03■□□□□ -0
CDK9-204ENST00000491521 TFDP1Q14186 410 aa15.03■□□□□ -0
CDK9-204ENST00000491521 NOMO2Q5JPE7 1267 aa15.03■□□□□ -0
CDK9-204ENST00000491521 GPBP1Q86WP2 473 aa15.03■□□□□ -0
CDK9-204ENST00000491521 SYT2Q8N9I0 419 aaPredicted RBP15.03■□□□□ -0
CDK9-204ENST00000491521 PGBD4Q96DM1 585 aa15.03■□□□□ -0
CDK9-204ENST00000491521 CPB2Q96IY4 423 aa15.03■□□□□ -0
CDK9-204ENST00000491521 APOL5Q9BWW9 433 aa15.03■□□□□ -0
CDK9-204ENST00000491521 GZF1Q9H116 711 aaPredicted RBP15.03■□□□□ -0
CDK9-204ENST00000491521 POLR3FQ9H1D9 316 aaPredicted RBP15.03■□□□□ -0
CDK9-204ENST00000491521 BLZF1Q9H2G9 400 aa15.03■□□□□ -0
CDK9-204ENST00000491521 CLEC1BQ9P126 229 aa15.03■□□□□ -0
CDK9-204ENST00000491521 FSCN2O14926 492 aa15.02■□□□□ -0
CDK9-204ENST00000491521 DGAT1O75907 488 aa15.02■□□□□ -0
CDK9-204ENST00000491521 SMC2O95347 1197 aa15.02■□□□□ -0
CDK9-204ENST00000491521 RARRES1P49788 294 aa15.02■□□□□ -0
CDK9-204ENST00000491521 ZP2Q05996 745 aa15.02■□□□□ -0
CDK9-204ENST00000491521 PNOCQ13519 176 aa15.02■□□□□ -0
CDK9-204ENST00000491521 CAPSQ13938 189 aa15.02■□□□□ -0
CDK9-204ENST00000491521 MXD4Q14582 209 aaPredicted RBP15.02■□□□□ -0
CDK9-204ENST00000491521 POSTNQ15063 836 aa15.02■□□□□ -0
CDK9-204ENST00000491521 DYMQ7RTS9 669 aa15.02■□□□□ -0
CDK9-204ENST00000491521 SLC39A11Q8N1S5 342 aa15.02■□□□□ -0
CDK9-204ENST00000491521 VN1R2Q8NFZ6 395 aa15.02■□□□□ -0
CDK9-204ENST00000491521 URGCPQ8TCY9 931 aa15.02■□□□□ -0
CDK9-204ENST00000491521 ERCC4Q92889 916 aaPredicted RBP15.02■□□□□ -0
CDK9-204ENST00000491521 APOL6Q9BWW8 343 aa15.02■□□□□ -0
CDK9-204ENST00000491521 C1QTNF1Q9BXJ1 281 aa15.02■□□□□ -0
CDK9-204ENST00000491521 GPRC5CQ9NQ84 441 aa15.02■□□□□ -0
CDK9-204ENST00000491521 TBC1D13Q9NVG8 400 aa15.02■□□□□ -0
CDK9-204ENST00000491521 KBTBD4Q9NVX7 518 aa15.02■□□□□ -0
CDK9-204ENST00000491521 LZTS1Q9Y250 596 aa15.02■□□□□ -0
CDK9-204ENST00000491521 MYMKA6NI61 221 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 LRRIQ4A6NIV6 560 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 TSPAN1O60635 241 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 OFD1O75665 1012 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 LETM1O95202 739 aaPredicted RBP15.01□□□□□ -0.01
CDK9-204ENST00000491521 PRR29P0C7W0 189 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 CASP1P29466 404 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 HOXA11P31270 313 aaPredicted RBP15.01□□□□□ -0.01
CDK9-204ENST00000491521 AFF1P51825 1210 aaKnown RBP15.01□□□□□ -0.01
CDK9-204ENST00000491521 SLC12A3P55017 1021 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 RAD51AP2Q09MP3 1159 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 CUL4BQ13620 913 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 DUSP6Q16828 381 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 UBXN11Q5T124 520 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 PDE12Q6L8Q7 609 aaKnown RBP15.01□□□□□ -0.01
CDK9-204ENST00000491521 PADI6Q6TGC4 694 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 AGMOQ6ZNB7 445 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 TMEM173Q86WV6 379 aaPredicted RBP15.01□□□□□ -0.01
CDK9-204ENST00000491521 ADHFE1Q8IWW8 467 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 ELOA2Q8IYF1 753 aaPredicted RBP15.01□□□□□ -0.01
CDK9-204ENST00000491521 AUTS2Q8WXX7 1259 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 TMEM169Q96HH4 297 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 MSLNLQ96KJ4 702 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 C7orf25Q9BPX7 421 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 TRAIPQ9BWF2 469 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 EIF2AQ9BY44 585 aaKnown RBP15.01□□□□□ -0.01
CDK9-204ENST00000491521 ZHX3Q9H4I2 956 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 NRDE2Q9H7Z3 1164 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 DNAJB4Q9UDY4 337 aa15.01□□□□□ -0.01
CDK9-204ENST00000491521 NPHP3-ACAD11A0A0J9YXS1 232 aa15□□□□□ -0.01
CDK9-204ENST00000491521 ZNF623O75123 536 aa15□□□□□ -0.01
CDK9-204ENST00000491521 POMCP01189 267 aa15□□□□□ -0.01
CDK9-204ENST00000491521 MYL1P05976 194 aa15□□□□□ -0.01
CDK9-204ENST00000491521 ITGA4P13612 1032 aa15□□□□□ -0.01
CDK9-204ENST00000491521 IDEP14735 1019 aa15□□□□□ -0.01
CDK9-204ENST00000491521 CYP11B2P19099 503 aa15□□□□□ -0.01
CDK9-204ENST00000491521 GLRA2P23416 452 aa15□□□□□ -0.01
CDK9-204ENST00000491521 ARL2P36404 184 aa15□□□□□ -0.01
CDK9-204ENST00000491521 PTENP60484 403 aa15□□□□□ -0.01
CDK9-204ENST00000491521 ASIC1P78348 528 aa15□□□□□ -0.01
CDK9-204ENST00000491521 MBTD1Q05BQ5 628 aa15□□□□□ -0.01
CDK9-204ENST00000491521 NCBP1Q09161 790 aaKnown RBP15□□□□□ -0.01
CDK9-204ENST00000491521 SMC1AQ14683 1233 aaKnown RBP15□□□□□ -0.01
CDK9-204ENST00000491521 SMAD2Q15796 467 aaKnown RBP15□□□□□ -0.01
CDK9-204ENST00000491521 RINT1Q6NUQ1 792 aa15□□□□□ -0.01
CDK9-204ENST00000491521 CDR2LQ86X02 465 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms