RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 DMDP11532 3685 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 CLUHO75153 1309 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 CCDC195A0A1B0GUA6 201 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 CCDC194A0A1B0GVG4 234 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 ANHXE9PGG2 379 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 CDKL5O76039 1030 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 POMCP01189 267 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 SSBP05455 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 CREMQ03060 361 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 ANGPT1Q15389 498 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 ME3Q16798 604 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 PHLDB3Q6NSJ2 640 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 ERMP1Q7Z2K6 904 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 SLC44A3Q8N4M1 653 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 FLCNQ8NFG4 579 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 GAD1Q99259 594 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 MTRQ99707 1265 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 COLEC11Q9BWP8 271 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 EIF2AQ9BY44 585 aaKnown RBP9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 NT5C3AQ9H0P0 336 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 RNF39Q9H2S5 420 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 ANKEF1Q9NU02 776 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 MIOSQ9NXC5 875 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 ZDHHC7Q9NXF8 308 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 DOCK6Q96HP0 2047 aa9.41□□□□□ -0.9
APOBEC3F-204ENST00000491387 FANCMQ8IYD8 2048 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 A0A1B0GUA9 196 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 KRBA1A5PL33 1030 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 JAK2O60674 1132 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 NR1I2O75469 434 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 DGAT1O75907 488 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 ERLIN2O94905 339 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 SLITRK3O94933 977 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 SRFP11831 508 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 XRCC6P12956 609 aaKnown RBP eCLIP9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 LAMP2P13473 410 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 FDPSP14324 419 aaKnown RBP9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 XBP1P17861 261 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 ARF4P18085 180 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 ARL2P36404 184 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 MLH1P40692 756 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 OR1G1P47890 313 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 MBTD1Q05BQ5 628 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 NCBP1Q09161 790 aaKnown RBP9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 TFDP1Q14186 410 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 USP41Q3LFD5 358 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 XKR9Q5GH70 373 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 SIX5Q8N196 739 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 SMG7Q92540 1137 aaKnown RBP9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 TNFRSF25Q93038 417 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 DYDC2Q96IM9 177 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 ZFP42Q96MM3 310 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 MYADMQ96S97 322 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 PRKD2Q9BZL6 878 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 SLKQ9H2G2 1235 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 SLC2A4RGQ9NR83 387 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 RGL1Q9NZL6 768 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 DLGAP2Q9P1A6 1054 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 FBXL21Q9UKT6 434 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 PRG3Q9Y2Y8 225 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 ZFP37Q9Y6Q3 630 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 DCHS1Q96JQ0 3298 aa9.4□□□□□ -0.9
APOBEC3F-204ENST00000491387 CITO14578 2027 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 VWA8A3KMH1 1905 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 SPDYE4A6NLX3 237 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 C2CD2LO14523 706 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 ZBTB39O15060 712 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 TGM5O43548 720 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 NARSO43776 548 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 CCNT1O60563 726 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 RFPL2O75678 378 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 ZMYND10O75800 440 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 BAG4O95429 457 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 POU2F2P09086 479 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 GBP2P32456 591 aaPredicted RBP9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 SCNN1GP51170 649 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 GRIK3Q13003 919 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 HTR4Q13639 388 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 CAPSQ13938 189 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 CTTNQ14247 550 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 FUT10Q6P4F1 479 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 PPP4R3CPQ6ZMV5 832 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 POTEDQ86YR6 584 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 HACE1Q8IYU2 909 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 ADSSL1Q8N142 457 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 GPR62Q9BZJ7 368 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 ADAM28Q9UKQ2 775 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 HES2Q9Y543 173 aa9.39□□□□□ -0.91
APOBEC3F-204ENST00000491387 NCOR2Q9Y618 2525 aa9.38□□□□□ -0.91
APOBEC3F-204ENST00000491387 INO80B-WBP1J3KQ70 363 aa9.38□□□□□ -0.91
APOBEC3F-204ENST00000491387 PFKFB2O60825 505 aa9.38□□□□□ -0.91
APOBEC3F-204ENST00000491387 HNRNPA1P09651 372 aaKnown RBP eCLIP9.38□□□□□ -0.91
APOBEC3F-204ENST00000491387 GLRA2P23416 452 aa9.38□□□□□ -0.91
APOBEC3F-204ENST00000491387 HOXA9P31269 272 aa9.38□□□□□ -0.91
APOBEC3F-204ENST00000491387 RARRES1P49788 294 aa9.38□□□□□ -0.91
APOBEC3F-204ENST00000491387 CYP4A11Q02928 519 aa9.38□□□□□ -0.91
APOBEC3F-204ENST00000491387 NR5A1Q13285 461 aa9.38□□□□□ -0.91
APOBEC3F-204ENST00000491387 FAM187BQ17R55 369 aa9.38□□□□□ -0.91
APOBEC3F-204ENST00000491387 NCAPH2Q6IBW4 605 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms