RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 RNF169Q8NCN4 708 aa5.93□□□□□ -1.46
PHC3-213ENST00000491258 MAGEC2Q9UBF1 373 aaPredicted RBP5.93□□□□□ -1.46
PHC3-213ENST00000491258 CDK11AQ9UQ88 783 aaPredicted RBP5.93□□□□□ -1.46
PHC3-213ENST00000491258 ZMYM3Q14202 1370 aa5.93□□□□□ -1.46
PHC3-213ENST00000491258 PRSS38A1L453 326 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 LCHNA4D1U4 455 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 ASMTLO95671 621 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 F2P00734 622 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 RBP3P10745 1247 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 MGAT1P26572 445 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 KPNA1P52294 538 aaPredicted RBP5.92□□□□□ -1.46
PHC3-213ENST00000491258 DSG1Q02413 1049 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 BMS1Q14692 1282 aaKnown RBP5.92□□□□□ -1.46
PHC3-213ENST00000491258 DDB1Q16531 1140 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 CCDC178Q5BJE1 867 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 DRICH1Q6PGQ1 229 aaPredicted RBP5.92□□□□□ -1.46
PHC3-213ENST00000491258 GLCCI1Q86VQ1 547 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 BOLLQ8N9W6 283 aaKnown RBP5.92□□□□□ -1.46
PHC3-213ENST00000491258 SIMC1Q8NDZ2 872 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 ASB10Q8WXI3 467 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 TFAP2CQ92754 450 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 ADAM2Q99965 735 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 KANSL2Q9H9L4 492 aa5.92□□□□□ -1.46
PHC3-213ENST00000491258 USP15Q9Y4E8 981 aaPredicted RBP5.92□□□□□ -1.46
PHC3-213ENST00000491258 POLR2AP24928 1970 aaKnown RBP5.92□□□□□ -1.46
PHC3-213ENST00000491258 B5MCH6 92 aa5.91□□□□□ -1.46
PHC3-213ENST00000491258 TGM5O43548 720 aa5.91□□□□□ -1.46
PHC3-213ENST00000491258 LTA4HP09960 611 aaKnown RBP5.91□□□□□ -1.46
PHC3-213ENST00000491258 MXRA7P84157 204 aa5.91□□□□□ -1.46
PHC3-213ENST00000491258 RESTQ13127 1097 aa5.91□□□□□ -1.46
PHC3-213ENST00000491258 ABHD17BQ5VST6 288 aa5.91□□□□□ -1.46
PHC3-213ENST00000491258 SH3TC2Q8TF17 1288 aa5.91□□□□□ -1.46
PHC3-213ENST00000491258 NELL1Q92832 810 aa5.91□□□□□ -1.46
PHC3-213ENST00000491258 ORAI3Q9BRQ5 295 aa5.91□□□□□ -1.46
PHC3-213ENST00000491258 MS4A5Q9H3V2 200 aa5.91□□□□□ -1.46
PHC3-213ENST00000491258 RNF181Q9P0P0 153 aa5.91□□□□□ -1.46
PHC3-213ENST00000491258 RFPL3O75679 317 aa5.9□□□□□ -1.46
PHC3-213ENST00000491258 SPDEFO95238 335 aa5.9□□□□□ -1.46
PHC3-213ENST00000491258 ITGAMP11215 1152 aa5.9□□□□□ -1.46
PHC3-213ENST00000491258 BLOC1S1P78537 153 aa5.9□□□□□ -1.46
PHC3-213ENST00000491258 NFE2L2Q16236 605 aa5.9□□□□□ -1.46
PHC3-213ENST00000491258 SP5Q6BEB4 398 aaPredicted RBP5.9□□□□□ -1.46
PHC3-213ENST00000491258 KIF18BQ86Y91 864 aa5.9□□□□□ -1.46
PHC3-213ENST00000491258 SLC44A3Q8N4M1 653 aa5.9□□□□□ -1.46
PHC3-213ENST00000491258 MDM1Q8TC05 714 aa5.9□□□□□ -1.46
PHC3-213ENST00000491258 GPR101Q96P66 508 aaPredicted RBP5.9□□□□□ -1.46
PHC3-213ENST00000491258 DNAJC2Q99543 621 aaKnown RBP5.9□□□□□ -1.46
PHC3-213ENST00000491258 SPATA5L1Q9BVQ7 753 aa5.9□□□□□ -1.46
PHC3-213ENST00000491258 FPGT-TNNI3KV9GXZ4 949 aa5.9□□□□□ -1.46
PHC3-213ENST00000491258 COL11A2P13942 1736 aaPredicted RBP5.9□□□□□ -1.47
PHC3-213ENST00000491258 TBKBP1A7MCY6 615 aa5.89□□□□□ -1.47
PHC3-213ENST00000491258 ITGA10O75578 1167 aa5.89□□□□□ -1.47
PHC3-213ENST00000491258 ESRRBO95718 433 aa5.89□□□□□ -1.47
PHC3-213ENST00000491258 ELLP55199 621 aaPredicted RBP5.89□□□□□ -1.47
PHC3-213ENST00000491258 MPP3Q13368 585 aa5.89□□□□□ -1.47
PHC3-213ENST00000491258 MRFAP1L1Q96HT8 127 aa5.89□□□□□ -1.47
PHC3-213ENST00000491258 PHACTR3Q96KR7 559 aa5.89□□□□□ -1.47
PHC3-213ENST00000491258 ANO3Q9BYT9 981 aa5.89□□□□□ -1.47
PHC3-213ENST00000491258 EVLQ9UI08 416 aaPredicted RBP5.89□□□□□ -1.47
PHC3-213ENST00000491258 PPP2R3BQ9Y5P8 575 aa5.89□□□□□ -1.47
PHC3-213ENST00000491258 C1RP00736 705 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 EGR2P11161 476 aaPredicted RBP5.88□□□□□ -1.47
PHC3-213ENST00000491258 LSP1P33241 339 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 KRTAP10-11P60412 298 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 C21orf62-AS1Q17RA5 79 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 GPR158Q5T848 1215 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 FAM102AQ5T9C2 384 aaPredicted RBP5.88□□□□□ -1.47
PHC3-213ENST00000491258 ABHD15Q6UXT9 468 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 ZNF610Q8N9Z0 462 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 CAGE1Q8TC20 777 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 TESQ9UGI8 421 aaKnown RBP5.88□□□□□ -1.47
PHC3-213ENST00000491258 PRSS50Q9UI38 385 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 TLK1Q9UKI8 766 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 NUMBLQ9Y6R0 609 aa5.88□□□□□ -1.47
PHC3-213ENST00000491258 INO80B-WBP1J3KQ70 363 aa5.87□□□□□ -1.47
PHC3-213ENST00000491258 CANXP27824 592 aaKnown RBP5.87□□□□□ -1.47
PHC3-213ENST00000491258 SART3Q15020 963 aaKnown RBP5.87□□□□□ -1.47
PHC3-213ENST00000491258 SF3A1Q15459 793 aaKnown RBP5.87□□□□□ -1.47
PHC3-213ENST00000491258 BMT2Q1RMZ1 405 aa5.87□□□□□ -1.47
PHC3-213ENST00000491258 CNNM4Q6P4Q7 775 aa5.87□□□□□ -1.47
PHC3-213ENST00000491258 PDZD4Q76G19 769 aaPredicted RBP5.87□□□□□ -1.47
PHC3-213ENST00000491258 HDGFL2Q7Z4V5 671 aaPredicted RBP5.87□□□□□ -1.47
PHC3-213ENST00000491258 ZFP28Q8NHY6 868 aa5.87□□□□□ -1.47
PHC3-213ENST00000491258 SNX33Q8WV41 574 aa5.87□□□□□ -1.47
PHC3-213ENST00000491258 CEP95Q96GE4 821 aa5.87□□□□□ -1.47
PHC3-213ENST00000491258 LRFN3Q9BTN0 628 aa5.87□□□□□ -1.47
PHC3-213ENST00000491258 INO80BQ9C086 356 aaPredicted RBP5.87□□□□□ -1.47
PHC3-213ENST00000491258 MTFR1LQ9H019 292 aa5.87□□□□□ -1.47
PHC3-213ENST00000491258 KIAA1586Q9HCI6 787 aa5.87□□□□□ -1.47
PHC3-213ENST00000491258 GPRC5DQ9NZD1 345 aa5.87□□□□□ -1.47
PHC3-213ENST00000491258 MARCH11A6NNE9 402 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 TMEM127O75204 238 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 CDKL5O76039 1030 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 FOSP01100 380 aaPredicted RBP5.86□□□□□ -1.47
PHC3-213ENST00000491258 MPLP40238 635 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 CHN2P52757 468 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 MANFP55145 182 aaKnown RBP5.86□□□□□ -1.47
PHC3-213ENST00000491258 PHC1P78364 1004 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 MEF2AQ02078 507 aaPredicted RBP5.86□□□□□ -1.47
PHC3-213ENST00000491258 TRIM25Q14258 630 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms