RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 FBXO18Q8NFZ0 1043 aa15.11■□□□□ 0.01
COL6A3-211ENST00000491233 BSNDQ8WZ55 320 aa15.11■□□□□ 0.01
COL6A3-211ENST00000491233 NACC1Q96RE7 527 aa15.11■□□□□ 0.01
COL6A3-211ENST00000491233 RPS6KC1Q96S38 1066 aa15.11■□□□□ 0.01
COL6A3-211ENST00000491233 PRMT7Q9NVM4 692 aaPredicted RBP15.11■□□□□ 0.01
COL6A3-211ENST00000491233 KLK14Q9P0G3 267 aa15.11■□□□□ 0.01
COL6A3-211ENST00000491233 MTCL1Q9Y4B5 1905 aaKnown RBP15.11■□□□□ 0.01
COL6A3-211ENST00000491233 A0A1B0GUA9 196 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 ARHGEF35A5YM69 484 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 EFEMP2O95967 443 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 RPA1P27694 616 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 GRIK3Q13003 919 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 MTMR3Q13615 1198 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 HAUS3Q68CZ6 603 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 PADI6Q6TGC4 694 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 TAS1R1Q7RTX1 841 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 GPR149Q86SP6 731 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 NOSTRINQ8IVI9 506 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 GSTCDQ8NEC7 633 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 PRSS33Q8NF86 280 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 PRIMPOLQ96LW4 560 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 ZSCAN31Q96LW9 406 aaPredicted RBP15.1■□□□□ 0.01
COL6A3-211ENST00000491233 KIF2CQ99661 725 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 MAN1C1Q9NR34 630 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 SH2B1Q9NRF2 756 aaPredicted RBP15.1■□□□□ 0.01
COL6A3-211ENST00000491233 PARP2Q9UGN5 583 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 NOL7Q9UMY1 257 aaKnown RBP15.1■□□□□ 0.01
COL6A3-211ENST00000491233 SORCS3Q9UPU3 1222 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 TRIOO75962 3097 aa15.1■□□□□ 0.01
COL6A3-211ENST00000491233 TEX28O15482 410 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 NR1I2O75469 434 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 BRD1O95696 1058 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 ASGR2P07307 311 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 ADH1AP07327 375 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 RBM25P49756 843 aaKnown RBP15.09■□□□□ 0.01
COL6A3-211ENST00000491233 VCPP55072 806 aaKnown RBP15.09■□□□□ 0.01
COL6A3-211ENST00000491233 NBR1Q14596 966 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 FAM187BQ17R55 369 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 TMEM132AQ24JP5 1023 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 CCDC149Q6ZUS6 474 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 ALYREFQ86V81 257 aaKnown RBP15.09■□□□□ 0.01
COL6A3-211ENST00000491233 COLEC11Q9BWP8 271 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 C2orf40Q9H1Z8 148 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 SMOC2Q9H3U7 446 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 FZD8Q9H461 694 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 PDZD7Q9H5P4 517 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 SSX2IPQ9Y2D8 614 aa15.09■□□□□ 0.01
COL6A3-211ENST00000491233 TRIP11Q15643 1979 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 TTLL13PA6NNM8 815 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 N4BP3O15049 544 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 GLUD1P00367 558 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 PDGFBP01127 241 aaPredicted RBP15.08■□□□□ 0
COL6A3-211ENST00000491233 EDN1P05305 212 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 PRKCBP05771 671 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 LIG1P18858 919 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 CYP11B2P19099 503 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 CCT6AP40227 531 aaKnown RBP15.08■□□□□ 0
COL6A3-211ENST00000491233 TRAPPC10P48553 1259 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 DSG1Q02413 1049 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 PRPF4BQ13523 1007 aaKnown RBP15.08■□□□□ 0
COL6A3-211ENST00000491233 C8orf34Q49A92 452 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 IER5LQ5T953 404 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 KIAA0319Q5VV43 1072 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 FUT10Q6P4F1 479 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 UBALD2Q8IYN6 164 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 ZDHHC14Q8IZN3 488 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 DEPTORQ8TB45 409 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 RABGGTAQ92696 567 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 B3GALT6Q96L58 329 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 CACNG4Q9UBN1 327 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 USTQ9Y2C2 406 aa15.08■□□□□ 0
COL6A3-211ENST00000491233 VWA8A3KMH1 1905 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 MYBP10242 640 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 NAMPTP43490 491 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
COL6A3-211ENST00000491233 PPP2R5AQ15172 486 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 ECM1Q16610 540 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 MAPK6Q16659 721 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 C15orf39Q6ZRI6 1047 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 C4orf32Q8N8J7 132 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 KIFC3Q9BVG8 833 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 GPR62Q9BZJ7 368 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 CCDC113Q9H0I3 377 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 RXFP1Q9HBX9 757 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 LIMD1Q9UGP4 676 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 ADAM28Q9UKQ2 775 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 USP20Q9Y2K6 914 aa15.07■□□□□ 0
COL6A3-211ENST00000491233 ZDBF2Q9HCK1 2354 aa15.06■□□□□ 0
COL6A3-211ENST00000491233 CASTOR2A6NHX0 329 aa15.06■□□□□ 0
COL6A3-211ENST00000491233 RECQL4O94761 1208 aa15.06■□□□□ 0
COL6A3-211ENST00000491233 MUTP22033 750 aa15.06■□□□□ 0
COL6A3-211ENST00000491233 MRE11P49959 708 aa15.06■□□□□ 0
COL6A3-211ENST00000491233 TUSC3Q13454 348 aa15.06■□□□□ 0
COL6A3-211ENST00000491233 HSP90AA2PQ14568 343 aaPredicted RBP15.06■□□□□ 0
COL6A3-211ENST00000491233 EEF1DP3Q658K8 133 aa15.06■□□□□ 0
COL6A3-211ENST00000491233 ELMSAN1Q6PJG2 1045 aa15.06■□□□□ 0
COL6A3-211ENST00000491233 CMASQ8NFW8 434 aaPredicted RBP15.06■□□□□ 0
COL6A3-211ENST00000491233 SNX29Q8TEQ0 813 aa15.06■□□□□ 0
COL6A3-211ENST00000491233 ACSF2Q96CM8 615 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms