RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 MIA3Q5JRA6 1907 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 MYH15Q9Y2K3 1946 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 CCDC194A0A1B0GVG4 234 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 TGM5O43548 720 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 SPATA31D3P0C874 917 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 LAMP2P13473 410 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 PTENP60484 403 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 XKR9Q5GH70 373 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 SPATA31D4Q6ZUB0 917 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 RUFY3Q7L099 469 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 GET4Q7L5D6 327 aaPredicted RBP23■■□□□ 1.27
CLIP2-208ENST00000491075 PALB2Q86YC2 1186 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 AIFM3Q96NN9 605 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 PRKD2Q9BZL6 878 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 RNF39Q9H2S5 420 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 FNIP2Q9P278 1114 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 HES2Q9Y543 173 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 ZMYM2Q9UBW7 1377 aa23■■□□□ 1.27
CLIP2-208ENST00000491075 ANHXE9PGG2 379 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 F8W810 466 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 REC8O95072 547 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 HTR4Q13639 388 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 TFDP1Q14186 410 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 USP41Q3LFD5 358 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 FUT10Q6P4F1 479 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 IFNLR1Q8IU57 520 aaPredicted RBP22.99■■□□□ 1.27
CLIP2-208ENST00000491075 RIN2Q8WYP3 895 aaPredicted RBP22.99■■□□□ 1.27
CLIP2-208ENST00000491075 ZNF274Q96GC6 653 aaPredicted RBP22.99■■□□□ 1.27
CLIP2-208ENST00000491075 CPB2Q96IY4 423 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 NAP1L4Q99733 375 aaKnown RBP22.99■■□□□ 1.27
CLIP2-208ENST00000491075 TRIM6Q9C030 488 aaPredicted RBP22.99■■□□□ 1.27
CLIP2-208ENST00000491075 ZSWIM4Q9H7M6 989 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 SLC2A4RGQ9NR83 387 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 MIOSQ9NXC5 875 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 SIT1Q9Y3P8 196 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 R4GN57 208 aa22.99■■□□□ 1.27
CLIP2-208ENST00000491075 INO80B-WBP1J3KQ70 363 aa22.98■■□□□ 1.27
CLIP2-208ENST00000491075 POU5F1BQ06416 359 aa22.98■■□□□ 1.27
CLIP2-208ENST00000491075 SPECC1Q5M775 1068 aa22.98■■□□□ 1.27
CLIP2-208ENST00000491075 B3GALT6Q96L58 329 aa22.98■■□□□ 1.27
CLIP2-208ENST00000491075 APOL6Q9BWW8 343 aa22.98■■□□□ 1.27
CLIP2-208ENST00000491075 GPR62Q9BZJ7 368 aa22.98■■□□□ 1.27
CLIP2-208ENST00000491075 RGL1Q9NZL6 768 aa22.98■■□□□ 1.27
CLIP2-208ENST00000491075 DLGAP2Q9P1A6 1054 aa22.98■■□□□ 1.27
CLIP2-208ENST00000491075 ADAM28Q9UKQ2 775 aa22.98■■□□□ 1.27
CLIP2-208ENST00000491075 KCNJ14Q9UNX9 436 aa22.98■■□□□ 1.27
CLIP2-208ENST00000491075 ZFP37Q9Y6Q3 630 aaPredicted RBP22.98■■□□□ 1.27
CLIP2-208ENST00000491075 MARCH6O60337 910 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 CCNT1O60563 726 aaKnown RBP22.97■■□□□ 1.27
CLIP2-208ENST00000491075 DCNP07585 359 aaKnown RBP22.97■■□□□ 1.27
CLIP2-208ENST00000491075 GRIK3Q13003 919 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 NCAPH2Q6IBW4 605 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 LILRA6Q6PI73 481 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 DCLRE1AQ6PJP8 1040 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 HAS1Q92839 578 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 DYDC2Q96IM9 177 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 PHF20Q9BVI0 1012 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 NXF3Q9H4D5 531 aaKnown RBP22.97■■□□□ 1.27
CLIP2-208ENST00000491075 ZSWIM6Q9HCJ5 1215 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 XPNPEP1Q9NQW7 623 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 NUMBLQ9Y6R0 609 aa22.97■■□□□ 1.27
CLIP2-208ENST00000491075 CYP4A11Q02928 519 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 MBTD1Q05BQ5 628 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 SPIRE1Q08AE8 756 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 AMHR2Q16671 573 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 GLYCTKQ8IVS8 523 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 C1orf210Q8IVY1 113 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 SLFN12Q8IYM2 578 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 PJA1Q8NG27 643 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 RMDN1Q96DB5 314 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 NFKBIZQ9BYH8 718 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 CYP46A1Q9Y6A2 500 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 DOCK6Q96HP0 2047 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 OTOGLQ3ZCN5 2332 aa22.96■■□□□ 1.27
CLIP2-208ENST00000491075 ZMYND10O75800 440 aa22.95■■□□□ 1.26
CLIP2-208ENST00000491075 SP9P0CG40 484 aa22.95■■□□□ 1.26
CLIP2-208ENST00000491075 ARF4P18085 180 aaPredicted RBP22.95■■□□□ 1.26
CLIP2-208ENST00000491075 CAPSQ13938 189 aa22.95■■□□□ 1.26
CLIP2-208ENST00000491075 CTTNQ14247 550 aaKnown RBP22.95■■□□□ 1.26
CLIP2-208ENST00000491075 POTEDQ86YR6 584 aa22.95■■□□□ 1.26
CLIP2-208ENST00000491075 KIAA2013Q8IYS2 634 aa22.95■■□□□ 1.26
CLIP2-208ENST00000491075 GSTCDQ8NEC7 633 aa22.95■■□□□ 1.26
CLIP2-208ENST00000491075 PATJQ8NI35 1801 aa22.95■■□□□ 1.26
CLIP2-208ENST00000491075 SHDQ96IW2 340 aa22.95■■□□□ 1.26
CLIP2-208ENST00000491075 SF3B1O75533 1304 aaKnown RBP eCLIP22.94■■□□□ 1.26
CLIP2-208ENST00000491075 ZBTB39O15060 712 aa22.94■■□□□ 1.26
CLIP2-208ENST00000491075 XBP1P17861 261 aa22.94■■□□□ 1.26
CLIP2-208ENST00000491075 RPL17P18621 184 aaKnown RBP22.94■■□□□ 1.26
CLIP2-208ENST00000491075 FSHRP23945 695 aa22.94■■□□□ 1.26
CLIP2-208ENST00000491075 STK3Q13188 491 aa22.94■■□□□ 1.26
CLIP2-208ENST00000491075 SLC27A1Q6PCB7 646 aa22.94■■□□□ 1.26
CLIP2-208ENST00000491075 TPH2Q8IWU9 490 aa22.94■■□□□ 1.26
CLIP2-208ENST00000491075 HINFPQ9BQA5 517 aa22.94■■□□□ 1.26
CLIP2-208ENST00000491075 CACNA1IQ9P0X4 2223 aa22.93■■□□□ 1.26
CLIP2-208ENST00000491075 DGAT1O75907 488 aa22.93■■□□□ 1.26
CLIP2-208ENST00000491075 CDKL5O76039 1030 aa22.93■■□□□ 1.26
CLIP2-208ENST00000491075 BAG4O95429 457 aaKnown RBP22.93■■□□□ 1.26
CLIP2-208ENST00000491075 AKAP5P24588 427 aa22.93■■□□□ 1.26
CLIP2-208ENST00000491075 STARD6P59095 220 aa22.93■■□□□ 1.26
CLIP2-208ENST00000491075 POTEGQ6S5H5 508 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms