RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 NOL7Q9UMY1 257 aaKnown RBP23.22■■□□□ 1.31
SYNE4-205ENST00000490730 A0A1B0GUA9 196 aa23.21■■□□□ 1.31
SYNE4-205ENST00000490730 RPA1P27694 616 aa23.21■■□□□ 1.31
SYNE4-205ENST00000490730 GLUD2P49448 558 aa23.21■■□□□ 1.31
SYNE4-205ENST00000490730 NHLH1Q02575 133 aa23.21■■□□□ 1.31
SYNE4-205ENST00000490730 ORC2Q13416 577 aaPredicted RBP23.21■■□□□ 1.31
SYNE4-205ENST00000490730 NBR1Q14596 966 aa23.21■■□□□ 1.31
SYNE4-205ENST00000490730 ALYREFQ86V81 257 aaKnown RBP23.21■■□□□ 1.31
SYNE4-205ENST00000490730 FBXL6Q8N531 539 aa23.21■■□□□ 1.31
SYNE4-205ENST00000490730 RPS6KC1Q96S38 1066 aa23.21■■□□□ 1.31
SYNE4-205ENST00000490730 SH2B1Q9NRF2 756 aaPredicted RBP23.21■■□□□ 1.31
SYNE4-205ENST00000490730 SSX2IPQ9Y2D8 614 aa23.21■■□□□ 1.31
SYNE4-205ENST00000490730 LILRB3O75022 631 aa23.2■■□□□ 1.3
SYNE4-205ENST00000490730 CCT6AP40227 531 aaKnown RBP23.2■■□□□ 1.3
SYNE4-205ENST00000490730 MTMR3Q13615 1198 aa23.2■■□□□ 1.3
SYNE4-205ENST00000490730 HAUS3Q68CZ6 603 aa23.2■■□□□ 1.3
SYNE4-205ENST00000490730 CDCA2Q69YH5 1023 aaPredicted RBP23.2■■□□□ 1.3
SYNE4-205ENST00000490730 ASIC4Q96FT7 647 aa23.2■■□□□ 1.3
SYNE4-205ENST00000490730 PRIMPOLQ96LW4 560 aa23.2■■□□□ 1.3
SYNE4-205ENST00000490730 COLEC11Q9BWP8 271 aa23.2■■□□□ 1.3
SYNE4-205ENST00000490730 MAN1C1Q9NR34 630 aa23.2■■□□□ 1.3
SYNE4-205ENST00000490730 SORCS3Q9UPU3 1222 aa23.2■■□□□ 1.3
SYNE4-205ENST00000490730 PLXNA3P51805 1871 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 CENPBP07199 599 aaPredicted RBP23.19■■□□□ 1.3
SYNE4-205ENST00000490730 ASGR2P07307 311 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 ADH1AP07327 375 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 MYBP10242 640 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 GRIK3Q13003 919 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 DEPTORQ8TB45 409 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 BSNDQ8WZ55 320 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 RABGGTAQ92696 567 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 B3GALT6Q96L58 329 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 C2orf40Q9H1Z8 148 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 LIMD1Q9UGP4 676 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 MYO10Q9HD67 2058 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 DENND4AQ7Z401 1863 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 KMT2EQ8IZD2 1858 aa23.19■■□□□ 1.3
SYNE4-205ENST00000490730 C2orf16Q68DN1 1984 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 ZDBF2Q9HCK1 2354 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 TEX28O15482 410 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 CYP11B2P19099 503 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 TRAPPC10P48553 1259 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 PRPF4BQ13523 1007 aaKnown RBP23.18■■□□□ 1.3
SYNE4-205ENST00000490730 IER5LQ5T953 404 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 PPP4R3CPQ6ZMV5 832 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 GPR149Q86SP6 731 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 GSTCDQ8NEC7 633 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 FZD8Q9H461 694 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 POLD4Q9HCU8 107 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 LRWD1Q9UFC0 647 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 USP20Q9Y2K6 914 aa23.18■■□□□ 1.3
SYNE4-205ENST00000490730 PIEZO1Q92508 2521 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 TTLL13PA6NNM8 815 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 N4BP3O15049 544 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 BRD1O95696 1058 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 GLUD1P00367 558 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 PRKCBP05771 671 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 MAPK6Q16659 721 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 KIAA0319Q5VV43 1072 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 ELMSAN1Q6PJG2 1045 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 CCDC149Q6ZUS6 474 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 UBALD2Q8IYN6 164 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 PRSS33Q8NF86 280 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 KIF2CQ99661 725 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 SMOC2Q9H3U7 446 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 PDZD7Q9H5P4 517 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 CACNG4Q9UBN1 327 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 ADAM28Q9UKQ2 775 aa23.17■■□□□ 1.3
SYNE4-205ENST00000490730 FXR2P51116 673 aaKnown RBP eCLIP23.16■■□□□ 1.3
SYNE4-205ENST00000490730 VCPP55072 806 aaKnown RBP23.16■■□□□ 1.3
SYNE4-205ENST00000490730 DSG1Q02413 1049 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 PPP2R5AQ15172 486 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 FAM187BQ17R55 369 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 FUT10Q6P4F1 479 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 GLYCTKQ8IVS8 523 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 RNF168Q8IYW5 571 aaPredicted RBP23.16■■□□□ 1.3
SYNE4-205ENST00000490730 ZDHHC14Q8IZN3 488 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 PLCD3Q8N3E9 789 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 ACSF2Q96CM8 615 aaPredicted RBP23.16■■□□□ 1.3
SYNE4-205ENST00000490730 IFT74Q96LB3 600 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 KIFC3Q9BVG8 833 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 GPR62Q9BZJ7 368 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 BHMT2Q9H2M3 363 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 SNTG2Q9NY99 539 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 KIAA1024Q9UPX6 916 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 USTQ9Y2C2 406 aa23.16■■□□□ 1.3
SYNE4-205ENST00000490730 ZMYM2Q9UBW7 1377 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 TADA2AO75478 443 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 PDGFBP01127 241 aaPredicted RBP23.15■■□□□ 1.3
SYNE4-205ENST00000490730 SPATA31D3P0C874 917 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 NAMPTP43490 491 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 ECM1Q16610 540 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 USP41Q3LFD5 358 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 C8orf34Q49A92 452 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 SPATA31D4Q6ZUB0 917 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 OTOP3Q7RTS5 596 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 PALB2Q86YC2 1186 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 SNX29Q8TEQ0 813 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 RIN2Q8WYP3 895 aaPredicted RBP23.15■■□□□ 1.3
SYNE4-205ENST00000490730 ADPGKQ9BRR6 497 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms