RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 KCNA1Q09470 495 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 ADAM9Q13443 819 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 IKBKEQ14164 716 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 NFIL3Q16649 462 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 CCDC40Q4G0X9 1142 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 SPATA1Q5VX52 437 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 CEP135Q66GS9 1140 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 C11orf57Q6ZUT1 292 aaPredicted RBP11.95□□□□□ -0.5
VARS2-210ENST00000490699 TAS1R3Q7RTX0 852 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 DEFB128Q7Z7B8 93 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 ZBTB33Q86T24 672 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 C12orf56Q8IXR9 622 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 GPD1LQ8N335 351 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 AOPEPQ8N6M6 819 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 XXYLT1Q8NBI6 393 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 ENOX1Q8TC92 643 aaKnown RBP11.95□□□□□ -0.5
VARS2-210ENST00000490699 PGBD4Q96DM1 585 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 CPB2Q96IY4 423 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 CEP63Q96MT8 703 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 FUCA2Q9BTY2 467 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 MTIF3Q9H2K0 278 aaKnown RBP11.95□□□□□ -0.5
VARS2-210ENST00000490699 KCTD10Q9H3F6 313 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 ERVK-5Q9HDB9 667 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 TOPORSQ9NS56 1045 aaPredicted RBP11.95□□□□□ -0.5
VARS2-210ENST00000490699 ZMYM2Q9UBW7 1377 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 A0A1B0GUA9 196 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 IKBKBO14920 756 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 CLIC2O15247 247 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 OGTO15294 1046 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 SLC16A3O15427 465 aaKnown RBP11.94□□□□□ -0.5
VARS2-210ENST00000490699 EXTL3O43909 919 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 NPTXRO95502 500 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 CDK11BP21127 795 aaKnown RBP11.94□□□□□ -0.5
VARS2-210ENST00000490699 PSMC2P35998 433 aaKnown RBP11.94□□□□□ -0.5
VARS2-210ENST00000490699 MCL1Q07820 350 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 SURF1Q15526 300 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 AMHR2Q16671 573 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 PLEKHG4Q58EX7 1191 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 ANKRD40Q6AI12 368 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 CNKSR3Q6P9H4 555 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 CREBRFQ8IUR6 639 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 SLC9A9Q8IVB4 645 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 SCLYQ96I15 445 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 MKNK1Q9BUB5 465 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 WNT8AQ9H1J5 351 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 SEMA6BQ9H3T3 888 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 THAP9Q9H5L6 903 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 PDZD7Q9H5P4 517 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 METTL14Q9HCE5 456 aaKnown RBP11.94□□□□□ -0.5
VARS2-210ENST00000490699 HSPBP1Q9NZL4 362 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 LRFN2Q9ULH4 789 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 NFE2L3Q9Y4A8 694 aa11.94□□□□□ -0.5
VARS2-210ENST00000490699 UMODL1Q5DID0 1318 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 A0A0B4J269 797 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 TRIM43BA6NCK2 446 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 TRIM49BA6NDI0 452 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 ZNF233A6NK53 670 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 TGFB1I1O43294 461 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 STX10O60499 249 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 CXCL10P02778 98 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 CLTAP09496 248 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 KCNJ6P48051 423 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 ZCWPW2Q504Y3 356 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 TTI2Q6NXR4 508 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 PSRC1Q6PGN9 363 aaPredicted RBP11.93□□□□□ -0.5
VARS2-210ENST00000490699 SPNS2Q8IVW8 549 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 FAM186BQ8IYM0 893 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 TRIM43Q96BQ3 446 aaPredicted RBP11.93□□□□□ -0.5
VARS2-210ENST00000490699 FNBP1Q96RU3 617 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 ADAM2Q99965 735 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 FAM213AQ9BRX8 229 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 SRRTQ9BXP5 876 aaKnown RBP11.93□□□□□ -0.5
VARS2-210ENST00000490699 CDT1Q9H211 546 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 PCIF1Q9H4Z3 704 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 AGO3Q9H9G7 860 aaKnown RBP11.93□□□□□ -0.5
VARS2-210ENST00000490699 RPF1Q9H9Y2 349 aaKnown RBP11.93□□□□□ -0.5
VARS2-210ENST00000490699 UBN1Q9NPG3 1134 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 STYXL1Q9Y6J8 313 aa11.93□□□□□ -0.5
VARS2-210ENST00000490699 ABHD14A-ACY1A0A1B0GW23 586 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 ANKRD63C9JTQ0 380 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 MAPK13O15264 365 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 HOXA2O43364 376 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 NBNO60934 754 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 BAIAP3O94812 1187 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 TPM3P06753 285 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 STAG3L1P0CL83 205 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 ITGA4P13612 1032 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 PRKCSHP14314 528 aaPredicted RBP11.92□□□□□ -0.5
VARS2-210ENST00000490699 CSF2RAP15509 400 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 IBSPP21815 317 aaPredicted RBP11.92□□□□□ -0.5
VARS2-210ENST00000490699 PROZP22891 400 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 EEF1GP26641 437 aaKnown RBP11.92□□□□□ -0.5
VARS2-210ENST00000490699 HOXA11P31270 313 aaPredicted RBP11.92□□□□□ -0.5
VARS2-210ENST00000490699 HOXD13P35453 343 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 MTIF2P46199 727 aaKnown RBP11.92□□□□□ -0.5
VARS2-210ENST00000490699 POU5F1Q01860 360 aaKnown RBP11.92□□□□□ -0.5
VARS2-210ENST00000490699 PPP2R3AQ06190 1150 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 SNRNP35Q16560 246 aaKnown RBP11.92□□□□□ -0.5
VARS2-210ENST00000490699 TRAF7Q6Q0C0 670 aa11.92□□□□□ -0.5
VARS2-210ENST00000490699 SLC24A5Q71RS6 500 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms