RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 COLGALT1Q8NBJ5 622 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 HELQQ8TDG4 1101 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 PRPF31Q8WWY3 499 aaKnown RBP8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 WASF1Q92558 559 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 P2RX5Q93086 422 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 PABPC5Q96DU9 382 aaKnown RBP8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 NLRP4Q96MN2 994 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 SCLT1Q96NL6 688 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 HSD17B14Q9BPX1 270 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 LXNQ9BS40 222 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 C11orf84Q9BUA3 381 aaPredicted RBP8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 PLVAPQ9BX97 442 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 GCOM2Q9BZD3 368 aaPredicted RBP8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 DHX33Q9H6R0 707 aaKnown RBP8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 IFT122Q9HBG6 1241 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 XPNPEP1Q9NQW7 623 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 C1orf112Q9NSG2 853 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 TMEM161AQ9NX61 479 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 MUTYHQ9UIF7 546 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 A0A0U1RQF3 1178 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 TBX3O15119 743 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 B4GALT3O60512 393 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 FGF18O76093 207 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 SPATA31C1P0DKV0 1188 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 ZSCAN20P17040 1043 aaPredicted RBP8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 HOXA11P31270 313 aaPredicted RBP8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 YWHABP31946 246 aaKnown RBP8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 MCM7P33993 719 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 NRIP1P48552 1158 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 TCF15Q12870 199 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 CALCRLQ16602 461 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 ECM1Q16610 540 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 TIGD5Q53EQ6 642 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 ODR4Q5SWX8 454 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 UBXN11Q5T124 520 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 MAEAQ7L5Y9 396 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 ADHFE1Q8IWW8 467 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 C4orf32Q8N8J7 132 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 VN1R2Q8NFZ6 395 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 FEZF2Q8TBJ5 459 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 ASAP3Q8TDY4 903 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 PIGOQ8TEQ8 1089 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 SNX27Q96L92 541 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 TMEM117Q9H0C3 514 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 LMAN2LQ9H0V9 348 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 ELAC1Q9H777 363 aaKnown RBP8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 TTC12Q9H892 705 aaPredicted RBP8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 MIOSQ9NXC5 875 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 CLEC1BQ9P126 229 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 CDV3Q9UKY7 258 aaKnown RBP8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 PCDHA12Q9UN75 941 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 DCHS1Q96JQ0 3298 aa8.17□□□□□ -1.1
PRPF4B-208ENST00000490653 HIDE1A8MVS5 230 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 FSCN2O14926 492 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 MBTPS2O43462 519 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 MED24O75448 989 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 OFD1O75665 1012 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 DDHD2O94830 711 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 BAG4O95429 457 aaKnown RBP8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 GLP2RO95838 553 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 DMDP11532 3685 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 TECP42680 631 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 PHKA2P46019 1235 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 DNM2P50570 870 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 TOB1P50616 345 aaPredicted RBP8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 LAMTOR4Q0VGL1 99 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 SMAD2Q15796 467 aaKnown RBP8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 NAALADL2Q58DX5 795 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 HERC4Q5GLZ8 1057 aaPredicted RBP8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 KANK3Q6NY19 840 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 KCNT2Q6UVM3 1135 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 AGMOQ6ZNB7 445 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 CATSPER4Q7RTX7 472 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 FERMT3Q86UX7 667 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 TMEM173Q86WV6 379 aaPredicted RBP8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 CDR2LQ86X02 465 aaPredicted RBP8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 SLFN12Q8IYM2 578 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 THNSL1Q8IYQ7 743 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 SVOPQ8N4V2 548 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 MICAL1Q8TDZ2 1067 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 BCL7CQ8WUZ0 217 aaPredicted RBP8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 CPB2Q96IY4 423 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 C8orf76Q96K31 380 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 MSLNLQ96KJ4 702 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 KCTD15Q96SI1 283 aaPredicted RBP8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 ZSWIM4Q9H7M6 989 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 NRDE2Q9H7Z3 1164 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 GPRC5CQ9NQ84 441 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 CDH22Q9UJ99 828 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 PIN4Q9Y237 131 aaKnown RBP8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 USP20Q9Y2K6 914 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 RWDD3Q9Y3V2 267 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 PCDHB12Q9Y5F1 795 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 COL4A3BPQ9Y5P4 624 aa8.16□□□□□ -1.1
PRPF4B-208ENST00000490653 NEMFO60524 1076 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 EOMESO95936 686 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 ALADP13716 330 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 ARL2P36404 184 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 POLGP54098 1239 aaPredicted RBP8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 TRIM29Q14134 588 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms