RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 N4BP3O15049 544 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 SLC26A4O43511 780 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 PLS3P13797 630 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 IL9P15248 144 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 NASPP49321 788 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-214ENST00000490398 EFNA5P52803 228 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 KRT17Q04695 432 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 DMP1Q13316 513 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-214ENST00000490398 TMEM132AQ24JP5 1023 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 AAK1Q2M2I8 961 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 ATF7IP2Q5U623 682 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 KCTD17Q8N5Z5 321 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 CEP120Q8N960 986 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 RABGGTAQ92696 567 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 TMEM169Q96HH4 297 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 UHRF1Q96T88 793 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-214ENST00000490398 REEP2Q9BRK0 252 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 TARS2Q9BW92 718 aaKnown RBP19.96■□□□□ 0.79
COL9A3-214ENST00000490398 TLE6Q9H808 572 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 ENTPD7Q9NQZ7 604 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 CLEC1BQ9P126 229 aa19.96■□□□□ 0.79
COL9A3-214ENST00000490398 PUF60Q9UHX1 559 aaKnown RBP19.96■□□□□ 0.79
COL9A3-214ENST00000490398 BDP1A6H8Y1 2624 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 HSP90AA1P07900 732 aaKnown RBP19.95■□□□□ 0.78
COL9A3-214ENST00000490398 ZSCAN22P10073 491 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-214ENST00000490398 DSC1Q08554 894 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 DUSP6Q16828 381 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 TMC7Q7Z402 723 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 EFHBQ8N7U6 833 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 LINC00301Q8NCQ3 95 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 TMEM161BQ8NDZ6 487 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 RSPH1Q8WYR4 309 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 ACO2Q99798 780 aaKnown RBP19.95■□□□□ 0.78
COL9A3-214ENST00000490398 NTPCRQ9BSD7 190 aaKnown RBP19.95■□□□□ 0.78
COL9A3-214ENST00000490398 TIPINQ9BVW5 301 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 PANK2Q9BZ23 570 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 TMEM134Q9H6X4 195 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 PTPRHQ9HD43 1115 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 BARX2Q9UMQ3 279 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-214ENST00000490398 PRG3Q9Y2Y8 225 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-214ENST00000490398 PHLPP2Q6ZVD8 1323 aa19.95■□□□□ 0.78
COL9A3-214ENST00000490398 ABLIM1O14639 778 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 PTGESO14684 152 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 RECQL4O94761 1208 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 OR1G1P47890 313 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 GIT2Q14161 759 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 PTCRAQ6ISU1 281 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-214ENST00000490398 TAS1R1Q7RTX1 841 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 VPS52Q8N1B4 723 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 RASSF8Q8NHQ8 419 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 SPIRE2Q8WWL2 714 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 CHAMP1Q96JM3 812 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 ZBTB45Q96K62 511 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-214ENST00000490398 FAM193BQ96PV7 902 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-214ENST00000490398 PAAF1Q9BRP4 392 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 TMEM175Q9BSA9 504 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 ZBP1Q9H171 429 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 CDT1Q9H211 546 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 KANSL3Q9P2N6 904 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 TNFSF13BQ9Y275 285 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 FAN1Q9Y2M0 1017 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 GDAQ9Y2T3 454 aa19.94■□□□□ 0.78
COL9A3-214ENST00000490398 GRXCR2A6NFK2 248 aa19.93■□□□□ 0.78
COL9A3-214ENST00000490398 C2orf71A6NGG8 1288 aa19.93■□□□□ 0.78
COL9A3-214ENST00000490398 F13A1P00488 732 aa19.93■□□□□ 0.78
COL9A3-214ENST00000490398 ALDH2P05091 517 aa19.93■□□□□ 0.78
COL9A3-214ENST00000490398 MAPTP10636 758 aaKnown RBP19.93■□□□□ 0.78
COL9A3-214ENST00000490398 IGFBP6P24592 240 aaPredicted RBP19.93■□□□□ 0.78
COL9A3-214ENST00000490398 DDIT3P35638 169 aa19.93■□□□□ 0.78
COL9A3-214ENST00000490398 KCNC3Q14003 757 aa19.93■□□□□ 0.78
COL9A3-214ENST00000490398 ZBTB33Q86T24 672 aa19.93■□□□□ 0.78
COL9A3-214ENST00000490398 DDX53Q86TM3 631 aaKnown RBP19.93■□□□□ 0.78
COL9A3-214ENST00000490398 MRPL43Q8N983 215 aaKnown RBP19.93■□□□□ 0.78
COL9A3-214ENST00000490398 KRI1Q8N9T8 703 aaKnown RBP19.93■□□□□ 0.78
COL9A3-214ENST00000490398 LARP4BQ92615 738 aaKnown RBP19.93■□□□□ 0.78
COL9A3-214ENST00000490398 MSLNLQ96KJ4 702 aa19.93■□□□□ 0.78
COL9A3-214ENST00000490398 C17orf75Q9HAS0 396 aa19.93■□□□□ 0.78
COL9A3-214ENST00000490398 NGRNQ9NPE2 291 aaKnown RBP19.93■□□□□ 0.78
COL9A3-214ENST00000490398 CD320Q9NPF0 282 aa19.93■□□□□ 0.78
COL9A3-214ENST00000490398 MORC2Q9Y6X9 1032 aaPredicted RBP19.93■□□□□ 0.78
COL9A3-214ENST00000490398 MEFVO15553 781 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-214ENST00000490398 NCK2O43639 380 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 CXCL14O95715 111 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 PROZP22891 400 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 NDUFV1P49821 464 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 NCKAP1LP55160 1127 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 STK38Q15208 465 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 NAB2Q15742 525 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 LLGL2Q6P1M3 1020 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 HACE1Q8IYU2 909 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 FIZ1Q96SL8 496 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 HAPLN2Q9GZV7 340 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 KCND2Q9NZV8 630 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 DAXXQ9UER7 740 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-214ENST00000490398 ZDHHC9Q9Y397 364 aa19.92■□□□□ 0.78
COL9A3-214ENST00000490398 RBM19Q9Y4C8 960 aaKnown RBP19.92■□□□□ 0.78
COL9A3-214ENST00000490398 CLASP2O75122 1294 aaKnown RBP19.91■□□□□ 0.78
COL9A3-214ENST00000490398 EFEMP2O95967 443 aa19.91■□□□□ 0.78
COL9A3-214ENST00000490398 CA8P35219 290 aa19.91■□□□□ 0.78
COL9A3-214ENST00000490398 ZNF131P52739 623 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms