RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 TISP43B9A030 160 aa15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 PIGRP01833 764 aa15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 SCP2P22307 547 aa15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 AKAP5P24588 427 aa15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 ERVK-21P61565 698 aa15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 ZPBP2Q6X784 338 aa15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 CEP120Q8N960 986 aa15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 APOL6Q9BWW8 343 aa15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 TRIM6Q9C030 488 aaPredicted RBP15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 TYW1Q9NV66 732 aaKnown RBP15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 MTUS1Q9ULD2 1270 aa15.78■□□□□ 0.12
SRGAP3-208ENST00000490348 PVALEFA0A1B0GWK0 134 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 HOXA2O43364 376 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 GTPBP6O43824 516 aaPredicted RBP15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 B4GALT3O60512 393 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 PRPF40AO75400 957 aaKnown RBP15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 TOM1L1O75674 476 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 GCNT3O95395 438 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 ITGA4P13612 1032 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 HOXD13P35453 343 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 DPYDQ12882 1025 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 ZNF568Q3ZCX4 644 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 MPZL3Q6UWV2 235 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 ZBTB33Q86T24 672 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 TMEM192Q8IY95 271 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 FIBCD1Q8N539 461 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 SLC17A8Q8NDX2 589 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 GSTCDQ8NEC7 633 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 PGBD4Q96DM1 585 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 ZFP42Q96MM3 310 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 GUCD1Q96NT3 240 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 TGS1Q96RS0 853 aaKnown RBP15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 CWH43Q9H720 699 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 RSAD1Q9HA92 442 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 SNTG2Q9NY99 539 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 ANKFY1Q9P2R3 1169 aa15.77■□□□□ 0.11
SRGAP3-208ENST00000490348 A0A0C4DFX4 3053 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 ARL5CA6NH57 179 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 ANKRD63C9JTQ0 380 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 HNRNPDLO14979 420 aaKnown RBP15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 MEFVO15553 781 aaPredicted RBP15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 FAM189A1O60320 539 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 MYL1P05976 194 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 MLH1P40692 756 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 MCL1Q07820 350 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 DCAF4L1Q3SXM0 396 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 L1TD1Q5T7N2 865 aaKnown RBP15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 GLB1LQ6UWU2 654 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 EPM2AIP1Q7L775 607 aaPredicted RBP15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 ABI1Q8IZP0 508 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 ARNTL2Q8WYA1 636 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 GAD1Q99259 594 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 ADPGKQ9BRR6 497 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 MTMR10Q9NXD2 777 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 INPP5FQ9Y2H2 1132 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 KIAA1671Q9BY89 1806 aa15.76■□□□□ 0.11
SRGAP3-208ENST00000490348 RFXAPO00287 272 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 INPPL1O15357 1258 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 PRPF6O94906 941 aaKnown RBP15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 UBE2HP62256 183 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 KMT5BQ4FZB7 885 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 EPC2Q52LR7 807 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 NOMO2Q5JPE7 1267 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 FAM26FQ5R3K3 315 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 HVCN1Q96D96 273 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 BICD1Q96G01 975 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 PRDM12Q9H4Q4 367 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 TBC1D13Q9NVG8 400 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 MIOSQ9NXC5 875 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 KLK14Q9P0G3 267 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 PLAGL2Q9UPG8 496 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 ZMYM2Q9UBW7 1377 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 RECQL4O94761 1208 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 RPN1P04843 607 aaKnown RBP15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 MCF2P10911 925 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 HARSP12081 509 aaKnown RBP15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 ADSSP30520 456 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 ABCD1P33897 745 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 LIG4P49917 911 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 STK4Q13043 487 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 PNOCQ13519 176 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 NOLC1Q14978 699 aaKnown RBP eCLIP15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 POSTNQ15063 836 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 SEZ6Q53EL9 994 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 ZBTB41Q5SVQ8 909 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 ZNF280BQ86YH2 543 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 LRRC43Q8N309 656 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 KIAA0895Q8NCT3 520 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 SCFD1Q8WVM8 642 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 ERCC4Q92889 916 aaPredicted RBP15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 TCHPQ9BT92 498 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 SLC39A2Q9NP94 309 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 GDAQ9Y2T3 454 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 GIT1Q9Y2X7 761 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 PCDHB13Q9Y5F0 798 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 STYXL1Q9Y6J8 313 aa15.75■□□□□ 0.11
SRGAP3-208ENST00000490348 NLRC5Q86WI3 1866 aa15.74■□□□□ 0.11
SRGAP3-208ENST00000490348 VCANP13611 3396 aa15.74■□□□□ 0.11
SRGAP3-208ENST00000490348 A0A0B4J269 797 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms