RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 RESTQ13127 1097 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 MAPK7Q13164 816 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 LLGL2Q6P1M3 1020 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 COLGALT2Q8IYK4 626 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 MRPL43Q8N983 215 aaKnown RBP21.77■■□□□ 1.08
SMC4-222ENST00000490207 RPS6KC1Q96S38 1066 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 VN1R3Q9BXE9 311 aa21.77■■□□□ 1.08
SMC4-222ENST00000490207 PRG3Q9Y2Y8 225 aaPredicted RBP21.77■■□□□ 1.08
SMC4-222ENST00000490207 CXCL14O95715 111 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 GUCY2CP25092 1073 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 OR1G1P47890 313 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 NPTX2P47972 431 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 ZP2Q05996 745 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 GRIK3Q13003 919 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 KCNC3Q14003 757 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 EEF1DP3Q658K8 133 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 GJD3Q8N144 294 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 SYT2Q8N9I0 419 aaPredicted RBP21.76■■□□□ 1.07
SMC4-222ENST00000490207 AUTS2Q8WXX7 1259 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 CALML4Q96GE6 196 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 CD320Q9NPF0 282 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 KMT5AQ9NQR1 393 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 MARCH5Q9NX47 278 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 KLK14Q9P0G3 267 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 STK39Q9UEW8 545 aa21.76■■□□□ 1.07
SMC4-222ENST00000490207 K7ERI5 159 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 PLA2G4BP0C869 781 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 LONP1P36776 959 aaKnown RBP21.75■■□□□ 1.07
SMC4-222ENST00000490207 UBA7P41226 1012 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 SLC12A3P55017 1021 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 GRIN1Q05586 938 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 RAD51AP2Q09MP3 1159 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 GIT2Q14161 759 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 DCAF4L1Q3SXM0 396 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 NT5DC1Q5TFE4 455 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 ATF7IP2Q5U623 682 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 TMEM184AQ6ZMB5 413 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 ADHFE1Q8IWW8 467 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 GSTCDQ8NEC7 633 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 C17orf75Q9HAS0 396 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 SNTG2Q9NY99 539 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 ARHGAP28Q9P2N2 729 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 IRAK3Q9Y616 596 aa21.75■■□□□ 1.07
SMC4-222ENST00000490207 CLASP2O75122 1294 aaKnown RBP21.74■■□□□ 1.07
SMC4-222ENST00000490207 NR1I2O75469 434 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 RECQL4O94761 1208 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 PTPN14Q15678 1187 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 ANKRD54Q6NXT1 300 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 TMEM87AQ8NBN3 555 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 RASSF8Q8NHQ8 419 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 CASP10Q92851 521 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 SNX21Q969T3 373 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 POP1Q99575 1024 aaKnown RBP21.74■■□□□ 1.07
SMC4-222ENST00000490207 HERC2P3Q9BVR0 1158 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 TMEM134Q9H6X4 195 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 KCND2Q9NZV8 630 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 CLIC4Q9Y696 253 aa21.74■■□□□ 1.07
SMC4-222ENST00000490207 C5orf42Q9H799 3197 aa21.73■■□□□ 1.07
SMC4-222ENST00000490207 APBB1IPQ7Z5R6 666 aaPredicted RBP21.73■■□□□ 1.07
SMC4-222ENST00000490207 MTMR6Q9Y217 621 aa21.73■■□□□ 1.07
SMC4-222ENST00000490207 USP15Q9Y4E8 981 aaPredicted RBP21.73■■□□□ 1.07
SMC4-222ENST00000490207 HCFC2Q9Y5Z7 792 aa21.73■■□□□ 1.07
SMC4-222ENST00000490207 SFI1A8K8P3 1242 aa21.72■■□□□ 1.07
SMC4-222ENST00000490207 SOD2P04179 222 aa21.72■■□□□ 1.07
SMC4-222ENST00000490207 PLCG1P19174 1290 aa21.72■■□□□ 1.07
SMC4-222ENST00000490207 PTPAQ15257 358 aa21.72■■□□□ 1.07
SMC4-222ENST00000490207 FAM173BQ6P4H8 233 aa21.72■■□□□ 1.07
SMC4-222ENST00000490207 TAS1R3Q7RTX0 852 aa21.72■■□□□ 1.07
SMC4-222ENST00000490207 HSCBQ8IWL3 235 aa21.72■■□□□ 1.07
SMC4-222ENST00000490207 MRPL4Q9BYD3 311 aaKnown RBP21.72■■□□□ 1.07
SMC4-222ENST00000490207 DAXXQ9UER7 740 aaPredicted RBP21.72■■□□□ 1.07
SMC4-222ENST00000490207 GDAQ9Y2T3 454 aa21.72■■□□□ 1.07
SMC4-222ENST00000490207 RBM19Q9Y4C8 960 aaKnown RBP21.72■■□□□ 1.07
SMC4-222ENST00000490207 TRIP11Q15643 1979 aa21.72■■□□□ 1.07
SMC4-222ENST00000490207 C19orf67A6NJJ6 358 aa21.71■■□□□ 1.07
SMC4-222ENST00000490207 SLC16A4O15374 487 aa21.71■■□□□ 1.07
SMC4-222ENST00000490207 STX6O43752 255 aa21.71■■□□□ 1.07
SMC4-222ENST00000490207 URODP06132 367 aa21.71■■□□□ 1.07
SMC4-222ENST00000490207 PLS3P13797 630 aa21.71■■□□□ 1.07
SMC4-222ENST00000490207 CACNB1Q02641 598 aaPredicted RBP21.71■■□□□ 1.07
SMC4-222ENST00000490207 KARSQ15046 597 aaKnown RBP21.71■■□□□ 1.07
SMC4-222ENST00000490207 GPBP1Q86WP2 473 aa21.71■■□□□ 1.07
SMC4-222ENST00000490207 LRRC15Q8TF66 581 aa21.71■■□□□ 1.07
SMC4-222ENST00000490207 KHSRPQ92945 711 aaKnown RBP eCLIP21.71■■□□□ 1.071e-6■□□□□ 9
SMC4-222ENST00000490207 ACO2Q99798 780 aaKnown RBP21.71■■□□□ 1.07
SMC4-222ENST00000490207 COLEC11Q9BWP8 271 aa21.71■■□□□ 1.07
SMC4-222ENST00000490207 TNFSF13BQ9Y275 285 aa21.71■■□□□ 1.07
SMC4-222ENST00000490207 NPHP3-ACAD11A0A0J9YXS1 232 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 F8W810 466 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 PTGESO14684 152 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 HOXB8P17481 243 aaPredicted RBP21.7■■□□□ 1.06
SMC4-222ENST00000490207 MARCKSP29966 332 aaPredicted RBP21.7■■□□□ 1.06
SMC4-222ENST00000490207 DHX8Q14562 1220 aaKnown RBP21.7■■□□□ 1.06
SMC4-222ENST00000490207 ZNF568Q3ZCX4 644 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 SYCE2Q6PIF2 218 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 SPIRE2Q8WWL2 714 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 RAD54LQ92698 747 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 APOL5Q9BWW9 433 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 EMILIN2Q9BXX0 1053 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 CDT1Q9H211 546 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms