RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 C19orf53Q9UNZ5 99 aaPredicted RBP3.49□□□□□ -1.85
UBXN4-208ENST00000490163 SNX11Q9Y5W9 270 aa3.49□□□□□ -1.85
UBXN4-208ENST00000490163 ABCA8O94911 1581 aa3.49□□□□□ -1.85
UBXN4-208ENST00000490163 MAP3K1Q13233 1512 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 FAM170AA1A519 330 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 OPHN1O60890 802 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 PTX3P26022 381 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 WNT3P56703 355 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 LMOD3Q0VAK6 560 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 MALLQ13021 153 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 NR0B2Q15466 257 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 FAM26FQ5R3K3 315 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 TTC22Q5TAA0 569 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 OGFOD3Q6PK18 319 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 BMP8AQ7Z5Y6 402 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 MIB1Q86YT6 1006 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 WFDC8Q8IUA0 241 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 RPAP2Q8IXW5 612 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 ASB15Q8WXK1 588 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 LENG1Q96BZ8 264 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 MKRN2Q9H000 416 aaKnown RBP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 MS4A5Q9H3V2 200 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 ABHD16BQ9H3Z7 469 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 PREBQ9HCU5 417 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 ARGLU1Q9NWB6 273 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 DNAJC28Q9NX36 388 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 SIDT1Q9NXL6 827 aaKnown RBP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 SOGA1O94964 1423 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 KIF27Q86VH2 1401 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 AQRO60306 1485 aaKnown RBP eCLIP3.48□□□□□ -1.859e-10■■■■■ 41.2
UBXN4-208ENST00000490163 GOLGA6L10A0A0M3HER8 536 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 FAM90A20PA6NIJ5 464 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 PTP4A3O75365 173 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 BAG2O95816 211 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 FBLN1P23142 703 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 GUCY1A2P33402 732 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 ECI1P42126 302 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 ADAM8P78325 824 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 TARBP2Q15633 366 aaKnown RBP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 FAM117BQ6P1L5 589 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 C11orf88Q6PI97 169 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 TREML4Q6UXN2 200 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 KCTD1Q719H9 257 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 TMPRSS7Q7RTY8 843 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 OSTM1Q86WC4 334 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 NRG4Q8WWG1 115 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 CASKIN2Q8WXE0 1202 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 PAAF1Q9BRP4 392 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 ZMAT3Q9HA38 289 aaKnown RBP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 RLIMQ9NVW2 624 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 ERVK13-1Q9NX77 482 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 DKK4Q9UBT3 224 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 WTIPA6NIX2 430 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 MGEA5O60502 916 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 NTSR2O95665 410 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 SLC9A1P19634 815 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 ABCB4P21439 1286 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 CCND1P24385 295 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 WNT3AP56704 352 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 CDC42EP1Q00587 391 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 INSM1Q01101 510 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-208ENST00000490163 PMS2P11Q13670 270 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 PARD3BQ8TEW8 1205 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 FMNL2Q96PY5 1086 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 LACRTQ9GZZ8 138 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 GPR35Q9HC97 309 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 KCNH3Q9ULD8 1083 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 MYPNQ86TC9 1320 aa3.48□□□□□ -1.85
UBXN4-208ENST00000490163 DISP1Q96F81 1524 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 A0A0B4J269 797 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 C19orf81C9J6K1 198 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 PSMD14O00487 310 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 ARHGEF15O94989 841 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 LAMP2P13473 410 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 BMP1P13497 986 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 DEKP35659 375 aaKnown RBP3.47□□□□□ -1.85
UBXN4-208ENST00000490163 STAT1P42224 750 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 PTP4A2Q12974 167 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 LRP8Q14114 963 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 PLS1Q14651 629 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 MROH9Q5TGP6 573 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 ADSSL1Q8N142 457 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 MIER2Q8N344 545 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 AOPEPQ8N6M6 819 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 C3orf20Q8ND61 904 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 IL17RDQ8NFM7 739 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 SEC62Q99442 399 aaKnown RBP3.47□□□□□ -1.85
UBXN4-208ENST00000490163 PLEKHA5Q9HAU0 1116 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 KMT5AQ9NQR1 393 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 PRDM8Q9NQV8 689 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 SH3GLB2Q9NR46 395 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 PICK1Q9NRD5 415 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 RGL1Q9NZL6 768 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 TNFRSF10DQ9UBN6 386 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 NUB1Q9Y5A7 615 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 ATRNL1Q5VV63 1379 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 RAPGEF2Q9Y4G8 1499 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 FAM234BA2RU67 622 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 FIBPO43427 364 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms