RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SLC46A2Q9BY10 475 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 SLKQ9H2G2 1235 aaPredicted RBP5.39□□□□□ -1.55
HMGN1-218ENST00000490032 GPRC5DQ9NZD1 345 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 HDAC5Q9UQL6 1122 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 ZMYM3Q14202 1370 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 TMEM191CA6NGB0 347 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 PRR5-ARHGAP8B1AHC4 643 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 B5MCH6 92 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 OVOL3O00110 214 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 SCAF4O95104 1147 aaKnown RBP5.38□□□□□ -1.55
HMGN1-218ENST00000490032 CRHR1P34998 444 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 PTTG1IPP53801 180 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 MRPS9P82933 396 aaKnown RBP5.38□□□□□ -1.55
HMGN1-218ENST00000490032 SMN1Q16637 294 aaKnown RBP5.38□□□□□ -1.55
HMGN1-218ENST00000490032 BTNL9Q6UXG8 535 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 CHAC2Q8WUX2 184 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 ZNF480Q8WV37 535 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 LMBR1Q8WVP7 490 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 DCLRE1CQ96SD1 692 aaKnown RBP5.38□□□□□ -1.55
HMGN1-218ENST00000490032 AGAP2Q99490 1192 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 ZNF768Q9H5H4 540 aaKnown RBP5.38□□□□□ -1.55
HMGN1-218ENST00000490032 C11orf21Q9P2W6 132 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 DPP7Q9UHL4 492 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 EIF2B4Q9UI10 523 aaKnown RBP5.38□□□□□ -1.55
HMGN1-218ENST00000490032 CHST2Q9Y4C5 530 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 DMRT1Q9Y5R6 373 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 RPTORQ8N122 1335 aa5.38□□□□□ -1.55
HMGN1-218ENST00000490032 LEFTY2O00292 366 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 RAMP2O60895 175 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 PHF2O75151 1096 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 EYA4O95677 639 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 APOBEC3AP31941 199 aaPredicted RBP5.37□□□□□ -1.55
HMGN1-218ENST00000490032 MST1LQ2TV78 715 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 LY6G5CQ5SRR4 150 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 LAIR1Q6GTX8 287 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 PDZD4Q76G19 769 aaPredicted RBP5.37□□□□□ -1.55
HMGN1-218ENST00000490032 SYT12Q8IV01 421 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 TSPEARQ8WU66 669 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 MYEOVQ96EZ4 313 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 MLST8Q9BVC4 326 aa5.37□□□□□ -1.55
HMGN1-218ENST00000490032 TBKBP1A7MCY6 615 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 DIRC3C9JPN6 131 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 ABHD16AO95870 558 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 VIL1P09327 827 aaKnown RBP5.36□□□□□ -1.55
HMGN1-218ENST00000490032 ZSCAN20P17040 1043 aaPredicted RBP5.36□□□□□ -1.55
HMGN1-218ENST00000490032 COL10A1Q03692 680 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 BMT2Q1RMZ1 405 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 PRAMEF14Q5SWL7 426 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 ANKS6Q68DC2 871 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 KCNK18Q7Z418 384 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 GDF7Q7Z4P5 450 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 MDM1Q8TC05 714 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 PROKR1Q8TCW9 393 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 CEP95Q96GE4 821 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 TTPALQ9BTX7 342 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 SCOCQ9UIL1 159 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 EDARQ9UNE0 448 aa5.36□□□□□ -1.55
HMGN1-218ENST00000490032 COL4A3Q01955 1670 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 GAGE12BA1L429 117 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 GAGE12HA6NDE8 117 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 TMEM200CA6NKL6 621 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 LAG3P18627 525 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 MGAT1P26572 445 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 FLT3LGP49771 235 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 FAM189BP81408 668 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 FAPQ12884 760 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 STAT4Q14765 748 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 MUM1Q2TAK8 710 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 TIGD2Q4W5G0 525 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 MFSD14BQ5SR56 506 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 GJC2Q5T442 439 aaPredicted RBP5.35□□□□□ -1.55
HMGN1-218ENST00000490032 KCNV1Q6PIU1 500 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 KRT26Q7Z3Y9 468 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 CMIPQ8IY22 773 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 GPR156Q8NFN8 814 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 OR10H5Q8NGA6 315 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 AUTS2Q8WXX7 1259 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 FAM193BQ96PV7 902 aaPredicted RBP5.35□□□□□ -1.55
HMGN1-218ENST00000490032 SPON1Q9HCB6 807 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 VTA1Q9NP79 307 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 TRPM5Q9NZQ8 1165 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 DKK2Q9UBU2 259 aa5.35□□□□□ -1.55
HMGN1-218ENST00000490032 CENPVL1A0A0U1RR11 272 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 GRID2IPA4D2P6 1211 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 GOLGA8AA7E2F4 631 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 RNASET2O00584 256 aaKnown RBP5.34□□□□□ -1.55
HMGN1-218ENST00000490032 PJA2O43164 708 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 RBP3P10745 1247 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 MTHFD2P13995 350 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 PROZP22891 400 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 CDK17Q00537 523 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 NHLH2Q02577 135 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 PTPAQ15257 358 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 ADRM1Q16186 407 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 ANO4Q32M45 955 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 FAM47AQ5JRC9 791 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 MBNL2Q5VZF2 373 aaKnown RBP5.34□□□□□ -1.55
HMGN1-218ENST00000490032 METRNLQ641Q3 311 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms