RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 HHEXQ03014 270 aa7.05□□□□□ -1.28
CCDC39-206ENST00000489868 RRP1BQ14684 758 aaKnown RBP7.05□□□□□ -1.28
CCDC39-206ENST00000489868 MFSD14BQ5SR56 506 aa7.05□□□□□ -1.28
CCDC39-206ENST00000489868 TRMT2AQ8IZ69 625 aaKnown RBP7.05□□□□□ -1.28
CCDC39-206ENST00000489868 MDGA1Q8NFP4 955 aa7.05□□□□□ -1.28
CCDC39-206ENST00000489868 PAWRQ96IZ0 340 aaKnown RBP7.05□□□□□ -1.28
CCDC39-206ENST00000489868 hCG_2014768A0A024R1R8 64 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 SHTN1A0MZ66 631 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 MATN3O15232 486 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 NDUFS2O75306 463 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 GSPT1P15170 499 aaKnown RBP7.04□□□□□ -1.28
CCDC39-206ENST00000489868 IBSPP21815 317 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-206ENST00000489868 CRHR1P34998 444 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 SREBF1P36956 1147 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 APBA1Q02410 837 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 ACAP2Q15057 778 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 NOMO1Q15155 1222 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 PTPN21Q16825 1174 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 USP39Q53GS9 565 aaKnown RBP7.04□□□□□ -1.28
CCDC39-206ENST00000489868 MFSD5Q6N075 450 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 APBB1IPQ7Z5R6 666 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-206ENST00000489868 ANKRD35Q8N283 1001 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 ST8SIA2Q92186 375 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 DPF2Q92785 391 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 PGBD4Q96DM1 585 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 TEKT5Q96M29 485 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 KCNH6Q9H252 994 aa7.04□□□□□ -1.28
CCDC39-206ENST00000489868 XPOTO43592 962 aaKnown RBP7.03□□□□□ -1.28
CCDC39-206ENST00000489868 PHF2O75151 1096 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 HK1P19367 917 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 MGAT2Q10469 447 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 PUM1Q14671 1186 aaKnown RBP eCLIP7.03□□□□□ -1.28
CCDC39-206ENST00000489868 RNF207Q6ZRF8 634 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 HTR3DQ70Z44 454 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 OR7D4Q8NG98 312 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 OR52N2Q8NGI0 321 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 SLC35B2Q8TB61 432 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 NRG4Q8WWG1 115 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 ATXN2LQ8WWM7 1075 aaKnown RBP7.03□□□□□ -1.28
CCDC39-206ENST00000489868 CDC5LQ99459 802 aaKnown RBP7.03□□□□□ -1.28
CCDC39-206ENST00000489868 PDCD2LQ9BRP1 358 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 ADI1Q9BV57 179 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 EPC1Q9H2F5 836 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 LDAHQ9H6V9 325 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 BCO1Q9HAY6 547 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 DNM3Q9UQ16 869 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 GIT1Q9Y2X7 761 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 ATRNL1Q5VV63 1379 aa7.03□□□□□ -1.28
CCDC39-206ENST00000489868 KLHL33A6NCF5 533 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 GASTP01350 101 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 GNAT2P19087 354 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 TNFRSF1AP19438 455 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 ECHS1P30084 290 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 KRT85P78386 507 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 DGCR2P98153 550 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 ZXDCQ2QGD7 858 aaPredicted RBP7.02□□□□□ -1.29
CCDC39-206ENST00000489868 LCE5AQ5TCM9 118 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 GPRIN1Q7Z2K8 1008 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 CPPED1Q9BRF8 314 aaPredicted RBP7.02□□□□□ -1.29
CCDC39-206ENST00000489868 GPR87Q9BY21 358 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 SLC13A1Q9BZW2 595 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 CEP72Q9P209 647 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 SERPINB13Q9UIV8 391 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 MYRFQ9Y2G1 1151 aa7.02□□□□□ -1.29
CCDC39-206ENST00000489868 GRXCR1A8MXD5 290 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 ZRANB2O95218 330 aaKnown RBP eCLIP7.01□□□□□ -1.29
CCDC39-206ENST00000489868 C1SP09871 688 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 FPR1P21462 350 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 GUCY1A2P33402 732 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 PTPN7P35236 360 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 NRN1LQ496H8 165 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 DOK3Q7L591 496 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 C1orf210Q8IVY1 113 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 THEMISQ8N1K5 641 aaPredicted RBP7.01□□□□□ -1.29
CCDC39-206ENST00000489868 PQLC1Q8N2U9 271 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.01□□□□□ -1.29
CCDC39-206ENST00000489868 STON2Q8WXE9 905 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 SSH1Q8WYL5 1049 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 MNTQ99583 582 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 DDX56Q9NY93 547 aaKnown RBP7.01□□□□□ -1.29
CCDC39-206ENST00000489868 INTUQ9ULD6 942 aa7.01□□□□□ -1.29
CCDC39-206ENST00000489868 CYP27B1O15528 508 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 MFAP3LO75121 409 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 IPO13O94829 963 aaKnown RBP7□□□□□ -1.29
CCDC39-206ENST00000489868 ALOX15P16050 662 aaPredicted RBP7□□□□□ -1.29
CCDC39-206ENST00000489868 EDNRBP24530 442 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 MAN2A2P49641 1150 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 ANAPC15P60006 121 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 EXOSC10Q01780 885 aaKnown RBP7□□□□□ -1.29
CCDC39-206ENST00000489868 CRHR2Q13324 411 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 ZNF572Q7Z3I7 529 aaPredicted RBP7□□□□□ -1.29
CCDC39-206ENST00000489868 TMPRSS6Q8IU80 811 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 SYT12Q8IV01 421 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 GSPT2Q8IYD1 628 aaKnown RBP7□□□□□ -1.29
CCDC39-206ENST00000489868 ZGPATQ8N5A5 531 aaKnown RBP7□□□□□ -1.29
CCDC39-206ENST00000489868 ZBTB21Q9ULJ3 1066 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 LIMCH1Q9UPQ0 1083 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 XDHP47989 1333 aa7□□□□□ -1.29
CCDC39-206ENST00000489868 AMY1AP04745 511 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms