RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 RNASE9P60153 205 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PRR20EP86478 221 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PRR20CP86479 221 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PRR20DP86480 221 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PRR20BP86481 221 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PRR20AP86496 221 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 DCTN2Q13561 401 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 MTFR1Q15390 333 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PLA2G2CQ5R387 149 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 COX20Q5RI15 118 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 ZNF697Q5TEC3 545 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 OLFML2BQ68BL8 750 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 TMEM53Q6P2H8 277 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 B3GNT6Q6ZMB0 384 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 SPATA31D4Q6ZUB0 917 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 HS2ST1Q7LGA3 356 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 CCDC84Q86UT8 332 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PASD1Q8IV76 773 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 CROCCP3Q8IVE0 287 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 ANKRD13CQ8N6S4 541 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 NEK9Q8TD19 979 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 NRG4Q8WWG1 115 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 CTNNBL1Q8WYA6 563 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 SYN2Q92777 582 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 BHMTQ93088 406 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PHKBQ93100 1093 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 SLC7A6OSQ96CW6 309 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 FMO2Q99518 471 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 NOC4LQ9BVI4 516 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 MYLK2Q9H1R3 596 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 EPB41L4BQ9H329 900 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 SYNCQ9H7C4 482 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 LRRC4CQ9HCJ2 640 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PFDN4Q9NQP4 134 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 SAR1AQ9NR31 198 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 RAB6BQ9NRW1 208 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 USP40Q9NVE5 1235 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 FAIMQ9NVQ4 179 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PAG1Q9NWQ8 432 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 CHPF2Q9P2E5 772 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 STX18Q9P2W9 335 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 STK17AQ9UEE5 414 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 LNPEPQ9UIQ6 1025 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 LRFN2Q9ULH4 789 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 EFR3BQ9Y2G0 817 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 MAP3K2Q9Y2U5 619 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 XDHP47989 1333 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 BICDL2A1A5D9 508 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 M0R2N6 131 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 TNFRSF10AO00220 468 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 PGRMC1O00264 195 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 KRIT1O00522 736 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 KCNK3O14649 394 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 NDUFB5O43674 189 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 DGAT1O75907 488 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 DCTN3O75935 186 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 FAM13AO94988 1023 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 PSMG1O95456 288 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 MYCP01106 439 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 FGAP02671 866 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 UBTFL6P0CB48 400 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 ZCCHC18P0CG32 403 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 T-ENOLP0DO92 83 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 TXKP42681 527 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 KLK7P49862 253 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 USP11P51784 963 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 POLGP54098 1239 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 EIF4A1P60842 406 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 MAP3K10Q02779 954 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 RNASELQ05823 741 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 MGAT5Q09328 741 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 TFCP2Q12800 502 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 AUHQ13825 339 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 DSC3Q14574 896 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 RCN1Q15293 331 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 INAQ16352 499 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 BCL2A1Q16548 175 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 CCDC153Q494R4 210 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 MIIPQ5JXC2 388 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 SH3PXD2AQ5TCZ1 1133 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 TTI2Q6NXR4 508 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 C16orf87Q6PH81 154 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 APOA5Q6Q788 366 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 NANOGNBQ7Z5D8 188 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 ZBED8Q8IZ13 594 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 THEMISQ8N1K5 641 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 RIBC1Q8N443 379 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 ZCRB1Q8TBF4 217 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 PIP4K2CQ8TBX8 421 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 ANKS1AQ92625 1134 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 TMEM87BQ96K49 555 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 TRIM47Q96LD4 638 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 MAGEB18Q96M61 343 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 LRRC37BQ96QE4 947 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 CGREF1Q99674 301 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 DDX50Q9BQ39 737 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 DBNDD2Q9BQY9 259 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 SLC26A6Q9BXS9 759 aa5.09□□□□□ -1.59
SNRNP40-206ENST00000489853 KIAA1683Q9H0B3 1180 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms