RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	IGFLR1	Q9H665	355 aa		12.19	□□□□□ -0.46
GGA1-222	ENST00000489772	UBE2Z	Q9H832	354 aa	Predicted RBP	12.19	□□□□□ -0.46
GGA1-222	ENST00000489772	NGRN	Q9NPE2	291 aa	Known RBP	12.19	□□□□□ -0.46
GGA1-222	ENST00000489772	ENTPD7	Q9NQZ7	604 aa		12.19	□□□□□ -0.46
GGA1-222	ENST00000489772	BLOC1S4	Q9NUP1	217 aa		12.19	□□□□□ -0.46
GGA1-222	ENST00000489772	TFIP11	Q9UBB9	837 aa	Known RBP	12.19	□□□□□ -0.46
GGA1-222	ENST00000489772	STK17A	Q9UEE5	414 aa		12.19	□□□□□ -0.46
GGA1-222	ENST00000489772	USP20	Q9Y2K6	914 aa		12.19	□□□□□ -0.46
GGA1-222	ENST00000489772	NT5C1B-RDH14	C9J2C7	533 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	DLL1	O00548	723 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	FSCN2	O14926	492 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	PPP6R2	O75170	966 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	TBCA	O75347	108 aa	Known RBP	12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	DDHD2	O94830	711 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	FAM13A	O94988	1023 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	YEATS4	O95619	227 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	SLC11A1	P49279	550 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	ERVFC1	P60507	584 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	HYAL1	Q12794	435 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	BECN1	Q14457	450 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	COL19A1	Q14993	1142 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	NT5DC1	Q5TFE4	455 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	ATL3	Q6DD88	541 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	TMC7	Q7Z402	723 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	MYCT1	Q8N699	235 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	LRRC15	Q8TF66	581 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	IGSF21	Q96ID5	467 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	RPS6KC1	Q96S38	1066 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	REEP2	Q9BRK0	252 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	TLE6	Q9H808	572 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	PARVG	Q9HBI0	331 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	CLDND1	Q9NY35	253 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	DNAJB4	Q9UDY4	337 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	STK39	Q9UEW8	545 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	CFAP45	Q9UL16	551 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	TNFSF13B	Q9Y275	285 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	FAN1	Q9Y2M0	1017 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	ZMYM2	Q9UBW7	1377 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	RALGAPA2	Q2PPJ7	1873 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	REV3L	O60673	3130 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	FSD2	A1L4K1	749 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	EDN1	P05305	212 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	MAPT	P10636	758 aa	Known RBP	12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	SCP2	P22307	547 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	NRIP1	P48552	1158 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	SCNN1G	P51170	649 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	PKP1	Q13835	747 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	GIT2	Q14161	759 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	LEXM	Q3ZCV2	418 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	PLPP4	Q5VZY2	271 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	EEF1DP3	Q658K8	133 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	RBM23	Q86U06	439 aa	Known RBP	12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	TMEM173	Q86WV6	379 aa	Predicted RBP	12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	COLGALT2	Q8IYK4	626 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	TMEM161B	Q8NDZ6	487 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	KCNG4	Q8TDN1	519 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	CDCA3	Q99618	268 aa	Predicted RBP	12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	ACO2	Q99798	780 aa	Known RBP	12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	TCHP	Q9BT92	498 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	ZHX3	Q9H4I2	956 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	SNTG2	Q9NY99	539 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	KLK14	Q9P0G3	267 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	PCDHGC5	Q9Y5F6	944 aa		12.18	□□□□□ -0.46
GGA1-222	ENST00000489772	B4GALT3	O60512	393 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	CUTA	O60888	179 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	RECQL4	O94761	1208 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	BMP1	P13497	986 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	STAT6	P42226	847 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	OR1G1	P47890	313 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	KCNQ1	P51787	676 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	ZNF131	P52739	623 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	GRIK3	Q13003	919 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	SMC1A	Q14683	1233 aa	Known RBP	12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	CTC1	Q2NKJ3	1217 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	PUS10	Q3MIT2	529 aa	Known RBP	12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	ZNF568	Q3ZCX4	644 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	SV2B	Q7L1I2	683 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	TAS1R3	Q7RTX0	852 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	ADGRD2	Q7Z7M1	963 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	DDX53	Q86TM3	631 aa	Known RBP	12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	VPS52	Q8N1B4	723 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	EFHB	Q8N7U6	833 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	GSTCD	Q8NEC7	633 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	TARS2	Q9BW92	718 aa	Known RBP	12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	PANK2	Q9BZ23	570 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	MIOS	Q9NXC5	875 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	GDA	Q9Y2T3	454 aa		12.17	□□□□□ -0.46
GGA1-222	ENST00000489772	CUL9	Q8IWT3	2517 aa		12.16	□□□□□ -0.46
GGA1-222	ENST00000489772	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	12.16	□□□□□ -0.46
GGA1-222	ENST00000489772		H3BQ06	376 aa	Predicted RBP	12.16	□□□□□ -0.46
GGA1-222	ENST00000489772		K7ENM7	598 aa		12.16	□□□□□ -0.46
GGA1-222	ENST00000489772	NRP1	O14786	923 aa		12.16	□□□□□ -0.46
GGA1-222	ENST00000489772	PER2	O15055	1255 aa		12.16	□□□□□ -0.46
GGA1-222	ENST00000489772	TRAK2	O60296	914 aa		12.16	□□□□□ -0.46
GGA1-222	ENST00000489772	TOM1L1	O75674	476 aa		12.16	□□□□□ -0.46
GGA1-222	ENST00000489772	MCF2	P10911	925 aa		12.16	□□□□□ -0.46
GGA1-222	ENST00000489772	ABCD1	P33897	745 aa		12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms