RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 JAKMIP3Q5VZ66 844 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 CEP135Q66GS9 1140 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 TXNDC11Q6PKC3 985 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 TSHZ1Q6ZSZ6 1077 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 AGGF1Q8N302 714 aaeCLIP10□□□□□ -0.81
TNRC6B-208ENST00000489500 FBXL16Q8N461 479 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 DNAJB3Q8WWF6 145 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 KCNB2Q92953 911 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 PPP2R3CQ969Q6 453 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 ZNF577Q9BSK1 485 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 RNF26Q9BY78 433 aaPredicted RBP10□□□□□ -0.81
TNRC6B-208ENST00000489500 ZMYND12Q9H0C1 365 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 RASSF4Q9H2L5 321 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 AGO4Q9HCK5 861 aaKnown RBP10□□□□□ -0.81
TNRC6B-208ENST00000489500 SRA1Q9HD15 236 aaKnown RBP10□□□□□ -0.81
TNRC6B-208ENST00000489500 ZNF302Q9NR11 478 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 CEP131Q9UPN4 1083 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 FAM50BQ9Y247 325 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 PCDHA2Q9Y5H9 948 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 TRPV2Q9Y5S1 764 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 SNX14Q9Y5W7 946 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 CYP46A1Q9Y6A2 500 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 CDY2AQ9Y6F7 541 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 CUL9Q8IWT3 2517 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 COL1A2P08123 1366 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 SMIM35A0A1B0GVV1 85 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 LCHNA4D1U4 455 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 MBLAC1A4D2B0 266 aaPredicted RBP9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 DDX39AO00148 427 aaKnown RBP9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 NCK2O43639 380 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 CHRNA1P02708 482 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 RB1P06400 928 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 CYP3A4P08684 503 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 ARP10275 920 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 XBP1P17861 261 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 CDC27P30260 824 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 NLRP5P59047 1200 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 SSRP1Q08945 709 aaKnown RBP9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 PAK2Q13177 524 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 GPM6BQ13491 265 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 ZNF484Q5JVG2 852 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 ZNF746Q6NUN9 644 aaPredicted RBP9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 PRR23CQ6ZRP0 262 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 TMCO2Q7Z6W1 182 aaPredicted RBP9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 SMAP1Q8IYB5 467 aaPredicted RBP9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 FAM177A1Q8N128 213 aaPredicted RBP9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 GDPD5Q8WTR4 605 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 C11orf84Q9BUA3 381 aaPredicted RBP9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 FAM49AQ9H0Q0 323 aaPredicted RBP9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 SUGCTQ9HAC7 445 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 SH3GLB2Q9NR46 395 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 ABI2Q9NYB9 513 aaPredicted RBP9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 SAMM50Q9Y512 469 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 TTC3P53804 2025 aa9.99□□□□□ -0.81
TNRC6B-208ENST00000489500 CDH23Q9H251 3354 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 IPO5O00410 1097 aaKnown RBP9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 HYAL3O43820 417 aaPredicted RBP9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 CDKL5O76039 1030 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 KIF4AO95239 1232 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 TMOD1P28289 359 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 CDC25BP30305 580 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 LRP8Q14114 963 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 PLCB4Q15147 1175 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 EPC2Q52LR7 807 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 FBXO47Q5MNV8 452 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 RUFY4Q6ZNE9 571 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 RUFY3Q7L099 469 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 MAP4K3Q8IVH8 894 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 TMEM192Q8IY95 271 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 ATP8B4Q8TF62 1192 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 MRPL38Q96DV4 380 aaKnown RBP9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 PGBD1Q96JS3 809 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 FAM167AQ96KS9 214 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 SPACA7Q96KW9 195 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 SLC26A6Q9BXS9 759 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 CELF4Q9BZC1 486 aaKnown RBP9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 LMAN2LQ9H0V9 348 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 NRBP2Q9NSY0 501 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 TMEM260Q9NX78 707 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 TMEM63CQ9P1W3 806 aa9.98□□□□□ -0.81
TNRC6B-208ENST00000489500 COL4A6Q14031 1691 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 EPOPA6NHQ4 379 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 H3BNC9 293 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 ENPP3O14638 875 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 GPR182O15218 404 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 MAGEB2O15479 319 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 DEXIO95424 95 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 IFNAR1P17181 557 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 KLRC1P26715 233 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 CTNNB1P35222 781 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 USP11P51784 963 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 MGAT3Q09327 533 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 BTG3Q14201 252 aaPredicted RBP9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 LPIN1Q14693 890 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 TCTN1Q2MV58 587 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 NAALADL2Q58DX5 795 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 GALNT17Q6IS24 598 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 SWSAP1Q6NVH7 229 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 MTHFD1LQ6UB35 978 aa9.97□□□□□ -0.81
TNRC6B-208ENST00000489500 ABHD15Q6UXT9 468 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms