RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 ST3GAL2Q16842 350 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 ATAT1Q5SQI0 421 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 KIAA0319Q5VV43 1072 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 CWF19L1Q69YN2 538 aaKnown RBP13.08□□□□□ -0.32
ACTN4-206ENST00000489451 NOTUMQ6P988 496 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 FRMD5Q7Z6J6 570 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 ZBTB33Q86T24 672 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 EXOC8Q8IYI6 725 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 UBALD2Q8IYN6 164 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 PIGOQ8TEQ8 1089 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 B3GALT6Q96L58 329 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 RPS6KC1Q96S38 1066 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 NAP1L4Q99733 375 aaKnown RBP13.08□□□□□ -0.32
ACTN4-206ENST00000489451 CXCL16Q9H2A7 254 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 TTC12Q9H892 705 aaPredicted RBP13.08□□□□□ -0.32
ACTN4-206ENST00000489451 GPRC5CQ9NQ84 441 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 ANKEF1Q9NU02 776 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 KANSL3Q9P2N6 904 aa13.08□□□□□ -0.32
ACTN4-206ENST00000489451 INO80B-WBP1J3KQ70 363 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 DGAT1O75907 488 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 ERLIN2O94905 339 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 PAPLNO95428 1278 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 EDN1P05305 212 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 MYBP10242 640 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 AKAP5P24588 427 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 KLRC2P26717 231 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 AXLP30530 894 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 MXD4Q14582 209 aaPredicted RBP13.07□□□□□ -0.32
ACTN4-206ENST00000489451 BMS1Q14692 1282 aaKnown RBP13.07□□□□□ -0.32
ACTN4-206ENST00000489451 PPFIBP1Q86W92 1011 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 DIS3L2Q8IYB7 885 aaKnown RBP13.07□□□□□ -0.32
ACTN4-206ENST00000489451 CCDC51Q96ER9 411 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 APOL6Q9BWW8 343 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 NFKBIZQ9BYH8 718 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 GPR62Q9BZJ7 368 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 RXFP1Q9HBX9 757 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 MAN1C1Q9NR34 630 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 MRPL17Q9NRX2 175 aaKnown RBP13.07□□□□□ -0.32
ACTN4-206ENST00000489451 CHST7Q9NS84 486 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 PCDHA12Q9UN75 941 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 VWA8A3KMH1 1905 aa13.07□□□□□ -0.32
ACTN4-206ENST00000489451 PKD1L2Q7Z442 2459 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 MARCH6O60337 910 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 NEMFO60524 1076 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 USO1O60763 962 aaKnown RBP13.06□□□□□ -0.32
ACTN4-206ENST00000489451 MED24O75448 989 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 RFPL2O75678 378 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 BAG4O95429 457 aaKnown RBP13.06□□□□□ -0.32
ACTN4-206ENST00000489451 SEC24BO95487 1268 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 NPR3P17342 541 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 TXKP42681 527 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 OR1G1P47890 313 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 DSG1Q02413 1049 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 PUM1Q14671 1186 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■□□□□ 10.8
ACTN4-206ENST00000489451 PCBP1Q15365 356 aaKnown RBP eCLIP13.06□□□□□ -0.32
ACTN4-206ENST00000489451 C15orf39Q6ZRI6 1047 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 CNNM3Q8NE01 707 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 BSNDQ8WZ55 320 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 WASF1Q92558 559 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 RABGGTAQ92696 567 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 ZNF707Q96C28 371 aaPredicted RBP13.06□□□□□ -0.32
ACTN4-206ENST00000489451 FAM193BQ96PV7 902 aaPredicted RBP13.06□□□□□ -0.32
ACTN4-206ENST00000489451 PAAF1Q9BRP4 392 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 EMILIN2Q9BXX0 1053 aa13.06□□□□□ -0.32
ACTN4-206ENST00000489451 POLR3FQ9H1D9 316 aaPredicted RBP13.06□□□□□ -0.32
ACTN4-206ENST00000489451 DMXL1Q9Y485 3027 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 A0A1B0GUA9 196 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 NPTXRO95502 500 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 URODP06132 367 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 GLUD2P49448 558 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 ANKRD1Q15327 319 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 CDCA2Q69YH5 1023 aaPredicted RBP13.05□□□□□ -0.32
ACTN4-206ENST00000489451 CCDC149Q6ZUS6 474 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 CATSPER3Q86XQ3 398 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 PLCD3Q8N3E9 789 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 TMEM87AQ8NBN3 555 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 CMASQ8NFW8 434 aaPredicted RBP13.05□□□□□ -0.32
ACTN4-206ENST00000489451 UBN1Q9NPG3 1134 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 USP20Q9Y2K6 914 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 GIT1Q9Y2X7 761 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 GVINP1Q7Z2Y8 2422 aa13.05□□□□□ -0.32
ACTN4-206ENST00000489451 NCOR2Q9Y618 2525 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 TRIP11Q15643 1979 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 PTGESO14684 152 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 PI15O43692 258 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 NARSO43776 548 aaKnown RBP13.04□□□□□ -0.32
ACTN4-206ENST00000489451 IGFBP6P24592 240 aaPredicted RBP13.04□□□□□ -0.32
ACTN4-206ENST00000489451 GUCY1B3Q02153 619 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 TFDP1Q14186 410 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 NAB2Q15742 525 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 FUT10Q6P4F1 479 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 LILRA6Q6PI73 481 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 MAEAQ7L5Y9 396 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 RSAD2Q8WXG1 361 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 MYADMQ96S97 322 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 RHOBTB2Q9BYZ6 727 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 FZD8Q9H461 694 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 KCNK12Q9HB15 430 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 WDR6Q9NNW5 1121 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms