RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SLITRK3O94933 977 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 LYPLA2O95372 231 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 LARGE1O95461 756 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 FDPSP14324 419 aaKnown RBP10.4□□□□□ -0.74
SNX17-207ENST00000489402 AOC1P19801 751 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 RFX1P22670 979 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 DSG1Q02413 1049 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 CREMQ03060 361 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 ANKRD1Q15327 319 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 CALCRLQ16602 461 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 CWF19L1Q69YN2 538 aaKnown RBP10.4□□□□□ -0.74
SNX17-207ENST00000489402 POTEGQ6S5H5 508 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 IFNLR1Q8IU57 520 aaPredicted RBP10.4□□□□□ -0.74
SNX17-207ENST00000489402 RNF168Q8IYW5 571 aaPredicted RBP10.4□□□□□ -0.74
SNX17-207ENST00000489402 SIX5Q8N196 739 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 HDAC7Q8WUI4 952 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 SMG7Q92540 1137 aaKnown RBP10.4□□□□□ -0.74
SNX17-207ENST00000489402 NKD2Q969F2 451 aaPredicted RBP10.4□□□□□ -0.74
SNX17-207ENST00000489402 RHOBTB2Q9BYZ6 727 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 RXFP1Q9HBX9 757 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 WDR6Q9NNW5 1121 aaKnown RBP10.4□□□□□ -0.74
SNX17-207ENST00000489402 XPNPEP1Q9NQW7 623 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.4□□□□□ -0.74
SNX17-207ENST00000489402 ANKEF1Q9NU02 776 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 TPCN1Q9ULQ1 816 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 DCHS1Q96JQ0 3298 aa10.4□□□□□ -0.74
SNX17-207ENST00000489402 ZMYM2Q9UBW7 1377 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 MTCL1Q9Y4B5 1905 aaKnown RBP10.39□□□□□ -0.75
SNX17-207ENST00000489402 PRR23AA6NEV1 266 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 STK25O00506 426 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 NEMFO60524 1076 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 RFPL2O75678 378 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 NPTXRO95502 500 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 C1RP00736 705 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 ARF4P18085 180 aaPredicted RBP10.39□□□□□ -0.75
SNX17-207ENST00000489402 MBTD1Q05BQ5 628 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 GRIK3Q13003 919 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 NR5A1Q13285 461 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 CAPSQ13938 189 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 USP41Q3LFD5 358 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 KIAA0319Q5VV43 1072 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 FUT10Q6P4F1 479 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 SLC27A1Q6PCB7 646 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 ASCL5Q7RTU5 278 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 CDR2LQ86X02 465 aaPredicted RBP10.39□□□□□ -0.75
SNX17-207ENST00000489402 NECAB1Q8N987 351 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 ST13P5Q8NFI4 369 aaPredicted RBP10.39□□□□□ -0.75
SNX17-207ENST00000489402 ASAP3Q8TDY4 903 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 RABGGTAQ92696 567 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 NXPE3Q969Y0 559 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 SNX27Q96L92 541 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 NFKBIZQ9BYH8 718 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 POLR3FQ9H1D9 316 aaPredicted RBP10.39□□□□□ -0.75
SNX17-207ENST00000489402 CXCL16Q9H2A7 254 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 NXF3Q9H4D5 531 aaKnown RBP10.39□□□□□ -0.75
SNX17-207ENST00000489402 PLEKHA4Q9H4M7 779 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 TTC12Q9H892 705 aaPredicted RBP10.39□□□□□ -0.75
SNX17-207ENST00000489402 CACNG4Q9UBN1 327 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 PARP2Q9UGN5 583 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 ADAM28Q9UKQ2 775 aa10.39□□□□□ -0.75
SNX17-207ENST00000489402 LRRIQ4A6NIV6 560 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 NARSO43776 548 aaKnown RBP10.38□□□□□ -0.75
SNX17-207ENST00000489402 USO1O60763 962 aaKnown RBP10.38□□□□□ -0.75
SNX17-207ENST00000489402 N4BP1O75113 896 aaKnown RBP10.38□□□□□ -0.75
SNX17-207ENST00000489402 EFEMP2O95967 443 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 CFHP08603 1231 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 SPATA31D3P0C874 917 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 GLRA2P23416 452 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 AKAP5P24588 427 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 IGFBP6P24592 240 aaPredicted RBP10.38□□□□□ -0.75
SNX17-207ENST00000489402 ARL2P36404 184 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 TXKP42681 527 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 FOSBP53539 338 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 TRIM29Q14134 588 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 AMHR2Q16671 573 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 SPATA31D4Q6ZUB0 917 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 FRMD5Q7Z6J6 570 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 PALB2Q86YC2 1186 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 GLYCTKQ8IVS8 523 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 CCDC105Q8IYK2 499 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 GPR65Q8IYL9 337 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 TNFRSF25Q93038 417 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 B3GALT6Q96L58 329 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 HSD17B14Q9BPX1 270 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 CHST7Q9NS84 486 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 ZDHHC7Q9NXF8 308 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.38□□□□□ -0.75
SNX17-207ENST00000489402 FNIP2Q9P278 1114 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 EPS15L1Q9UBC2 864 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 WNT16Q9UBV4 365 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 USP20Q9Y2K6 914 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 COL4A3Q01955 1670 aa10.38□□□□□ -0.75
SNX17-207ENST00000489402 SF3B1O75533 1304 aaKnown RBP eCLIP10.37□□□□□ -0.75
SNX17-207ENST00000489402 A0A1B0GUA9 196 aa10.37□□□□□ -0.75
SNX17-207ENST00000489402 TTLL13PA6NNM8 815 aa10.37□□□□□ -0.75
SNX17-207ENST00000489402 B4GALT5O43286 388 aa10.37□□□□□ -0.75
SNX17-207ENST00000489402 TGM5O43548 720 aa10.37□□□□□ -0.75
SNX17-207ENST00000489402 PI15O43692 258 aa10.37□□□□□ -0.75
SNX17-207ENST00000489402 TADA2AO75478 443 aa10.37□□□□□ -0.75
SNX17-207ENST00000489402 SRFP11831 508 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms