RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 DNAJB3Q8WWF6 145 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 ZBTB45Q96K62 511 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-220ENST00000489318 PANX2Q96RD6 677 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 MSTO1Q9BUK6 570 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 SEZ6LQ9BYH1 1024 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 GCOM2Q9BZD3 368 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-220ENST00000489318 PDZD7Q9H5P4 517 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.5□□□□□ -0.41
C9orf3-220ENST00000489318 ANKFY1Q9P2R3 1169 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 CAPN11Q9UMQ6 739 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 USP20Q9Y2K6 914 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 DAAM1Q9Y4D1 1078 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 TANC1Q9C0D5 1861 aa12.5□□□□□ -0.41
C9orf3-220ENST00000489318 A0A1W2PQ45 241 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-220ENST00000489318 A0A1W2PQY0 241 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 TTC26A0AVF1 554 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 GOLGA8IPA6NC78 632 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 ZNF233A6NK53 670 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 GOLGA8JA6NMD2 632 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 LRRIQ3A6PVS8 624 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-220ENST00000489318 AKR1B15C9JRZ8 316 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-220ENST00000489318 STX10O60499 249 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 TPM1P09493 284 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 MCF2P10911 925 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 HSPA8P11142 646 aaKnown RBP12.49□□□□□ -0.41
C9orf3-220ENST00000489318 ARF4P18085 180 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-220ENST00000489318 EIF4BP23588 611 aaKnown RBP12.49□□□□□ -0.41
C9orf3-220ENST00000489318 KCNJ6P48051 423 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 KLK7P49862 253 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 CRYBB1P53674 252 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-220ENST00000489318 CHMP4BP1P59074 171 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 DLG4P78352 724 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 PPP3CAQ08209 521 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 MGAT3Q09327 533 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 SNX17Q15036 470 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 KIZQ2M2Z5 673 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 ZNF568Q3ZCX4 644 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 CBWD6Q4V339 395 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 CBWD3Q5JTY5 395 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 CBWD5Q5RIA9 395 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 EEF1DP3Q658K8 133 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 GBP6Q6ZN66 633 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 C15orf39Q6ZRI6 1047 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 ZSCAN30Q86W11 494 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 PPFIBP1Q86W92 1011 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 RDH13Q8NBN7 331 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 ARRDC4Q8NCT1 418 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 ZNF668Q96K58 619 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-220ENST00000489318 GLT1D1Q96MS3 346 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 DNAJC7Q99615 494 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 FAM213AQ9BRX8 229 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 UNC93B1Q9H1C4 597 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 CDT1Q9H211 546 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 GANQ9H2C0 597 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 ABHD10Q9NUJ1 306 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 CPSF3Q9UKF6 684 aaKnown RBP12.49□□□□□ -0.41
C9orf3-220ENST00000489318 COQ4Q9Y3A0 265 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 CITO14578 2027 aa12.49□□□□□ -0.41
C9orf3-220ENST00000489318 A0A1B0GUA9 196 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 RNF225M0QZC1 329 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-220ENST00000489318 DNM1LO00429 736 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 EPHB6O15197 1021 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 CAND2O75155 1236 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 NOL4O94818 638 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 ERLIN2O94905 339 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 TRIM21P19474 475 aaKnown RBP12.48□□□□□ -0.41
C9orf3-220ENST00000489318 PON1P27169 355 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 AXLP30530 894 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 HNRNPH3P31942 346 aaKnown RBP12.48□□□□□ -0.41
C9orf3-220ENST00000489318 MRPS6P82932 125 aaKnown RBP12.48□□□□□ -0.41
C9orf3-220ENST00000489318 ZBED6P86452 979 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 MYL7Q01449 175 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 LRMPQ12912 555 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 PTK7Q13308 1070 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 ITGA7Q13683 1181 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 KYAT1Q16773 422 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 EXOC3L4Q17RC7 722 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 SLC9C1Q4G0N8 1177 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 EPC2Q52LR7 807 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 ZBTB41Q5SVQ8 909 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 TRIM65Q6PJ69 517 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 LMO3Q8TAP4 145 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 TMEM40Q8WWA1 233 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 BAP1Q92560 729 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 WNT8BQ93098 351 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 SCLT1Q96NL6 688 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 PPP1R16BQ96T49 567 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 OSMRQ99650 979 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 NAA15Q9BXJ9 866 aaKnown RBP12.48□□□□□ -0.41
C9orf3-220ENST00000489318 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 TMEM8AQ9HCN3 771 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 SIX2Q9NPC8 291 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 AGPAT5Q9NUQ2 364 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 RBAKQ9NYW8 714 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-220ENST00000489318 GCNT4Q9P109 453 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 CEP72Q9P209 647 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 OGDHLQ9ULD0 1010 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 TRPV2Q9Y5S1 764 aa12.48□□□□□ -0.41
C9orf3-220ENST00000489318 A0A0U1RQG5 324 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms