RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 GRM7Q14831 915 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 SART3Q15020 963 aaKnown RBP3.62□□□□□ -1.83
CALD1-221ENST00000489019 GPR158Q5T848 1215 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 SDE2Q6IQ49 451 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 TIGD7Q6NT04 549 aaPredicted RBP3.62□□□□□ -1.83
CALD1-221ENST00000489019 MAMDC4Q6UXC1 1216 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 FKBP9P1Q75LS8 142 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 POLNQ7Z5Q5 900 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 STRA8Q7Z7C7 330 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 CLEC14AQ86T13 490 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 ZNF808Q8N4W9 903 aaPredicted RBP3.62□□□□□ -1.83
CALD1-221ENST00000489019 ANKRD53Q8N9V6 530 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.62□□□□□ -1.83
CALD1-221ENST00000489019 OR2W6PQ8NHA6 318 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 RABGGTAQ92696 567 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 LPPQ93052 612 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 GFM2Q969S9 779 aaKnown RBP3.62□□□□□ -1.83
CALD1-221ENST00000489019 SLC7A6OSQ96CW6 309 aaPredicted RBP3.62□□□□□ -1.83
CALD1-221ENST00000489019 TMEM176AQ96HP8 235 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 RPL10LQ96L21 214 aaKnown RBP3.62□□□□□ -1.83
CALD1-221ENST00000489019 WDR92Q96MX6 357 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 SLC6A15Q9H2J7 730 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 SLC12A5Q9H2X9 1139 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 MSL2Q9HCI7 577 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 HECAQ9UBI9 543 aaPredicted RBP3.62□□□□□ -1.83
CALD1-221ENST00000489019 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.62□□□□□ -1.83
CALD1-221ENST00000489019 MAPRE3Q9UPY8 281 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 CGNL1Q0VF96 1302 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 PIK3C2BO00750 1634 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 NPC1L1Q9UHC9 1359 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 SBNO2Q9Y2G9 1366 aa3.62□□□□□ -1.83
CALD1-221ENST00000489019 CLTCQ00610 1675 aaKnown RBP3.62□□□□□ -1.83
CALD1-221ENST00000489019 PRSS38A1L453 326 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 PFKMP08237 780 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 BPIP17213 487 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 ID4P47928 161 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 SESN2P58004 480 aaPredicted RBP3.61□□□□□ -1.83
CALD1-221ENST00000489019 BPIFB4P59827 614 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 PRKD1Q15139 912 aaPredicted RBP3.61□□□□□ -1.83
CALD1-221ENST00000489019 BROXQ5VW32 411 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 SPTY2D1Q68D10 685 aaPredicted RBP3.61□□□□□ -1.83
CALD1-221ENST00000489019 HDGFL2Q7Z4V5 671 aaPredicted RBP3.61□□□□□ -1.83
CALD1-221ENST00000489019 ADGRE4PQ86SQ3 457 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 PASD1Q8IV76 773 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 Q8N1X5 172 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 UBR7Q8N806 425 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 ZNF610Q8N9Z0 462 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 PLA2G15Q8NCC3 412 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.61□□□□□ -1.83
CALD1-221ENST00000489019 PPP1R14CQ8TAE6 165 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 GCDHQ92947 438 aaPredicted RBP3.61□□□□□ -1.83
CALD1-221ENST00000489019 PRAM1Q96QH2 718 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 NOL10Q9BSC4 688 aaKnown RBP3.61□□□□□ -1.83
CALD1-221ENST00000489019 KRTAP4-5Q9BYR2 181 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 NELFAQ9H3P2 528 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 PRDM12Q9H4Q4 367 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 TLR9Q9NR96 1032 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.61□□□□□ -1.83
CALD1-221ENST00000489019 USP36Q9P275 1121 aaKnown RBP3.61□□□□□ -1.83
CALD1-221ENST00000489019 TMPRSS11EQ9UL52 423 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 MYPNQ86TC9 1320 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 ANKRD36BQ8N2N9 1353 aa3.61□□□□□ -1.83
CALD1-221ENST00000489019 AGLP35573 1532 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 ADGRB1O14514 1584 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 TMEM131LA2VDJ0 1609 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 A0A1W2PRX2 142 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 NEMP1O14524 444 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 APAF1O14727 1248 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 PLIN1O60240 522 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 TOX4O94842 621 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 HSD3B2P26439 372 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 LSP1P33241 339 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 OCRLQ01968 901 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 CD69Q07108 199 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 DHCR24Q15392 516 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 DDB1Q16531 1140 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 USP39Q53GS9 565 aaKnown RBP3.6□□□□□ -1.83
CALD1-221ENST00000489019 HS1BP3Q53T59 392 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 ESPNLQ6ZVH7 1005 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 GAREM2Q75VX8 874 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 CXorf67Q86X51 503 aaPredicted RBP3.6□□□□□ -1.83
CALD1-221ENST00000489019 LYSMD2Q8IV50 215 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 PIK3C3Q8NEB9 887 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 EXOC6Q8TAG9 804 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 SLC5A5Q92911 643 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 EXTL1Q92935 676 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 FDXACB1Q9BRP7 624 aaPredicted RBP3.6□□□□□ -1.83
CALD1-221ENST00000489019 ZNF747Q9BV97 191 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 CDK19Q9BWU1 502 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 ANO3Q9BYT9 981 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 TERF2IPQ9NYB0 399 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 SH3BP1Q9Y3L3 701 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 PCDHB6Q9Y5E3 794 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 PPP2R3BQ9Y5P8 575 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 ARHGEF28Q8N1W1 1705 aaKnown RBP3.6□□□□□ -1.83
CALD1-221ENST00000489019 RNF123Q5XPI4 1314 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 MYO5BQ9ULV0 1848 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 POLR3AO14802 1390 aaPredicted RBP3.6□□□□□ -1.83
CALD1-221ENST00000489019 NINLQ9Y2I6 1382 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 ZFYVE9O95405 1425 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms