RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 KCNQ1P51787 676 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 SLC12A3P55017 1021 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 AMPD3Q01432 767 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 HYAL1Q12794 435 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 GRIK3Q13003 919 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 MCM6Q14566 821 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 AMHR2Q16671 573 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 LEXMQ3ZCV2 418 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 ATL3Q6DD88 541 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 PTCRAQ6ISU1 281 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 KCNK18Q7Z418 384 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 ZBTB33Q86T24 672 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 DDX53Q86TM3 631 aaKnown RBP12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 KCNG4Q8TDN1 519 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 SPIRE2Q8WWL2 714 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 IGSF21Q96ID5 467 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 EPSTI1Q96J88 318 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 USP28Q96RU2 1077 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 PDZD7Q9H5P4 517 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 NRDE2Q9H7Z3 1164 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 SNTG2Q9NY99 539 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 FAM13BQ9NYF5 915 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 KLK14Q9P0G3 267 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 ANKFY1Q9P2R3 1169 aa12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 TFIP11Q9UBB9 837 aaKnown RBP12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 PRG3Q9Y2Y8 225 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF39-204ENST00000488918 RALGAPA2Q2PPJ7 1873 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 COL4A4P53420 1690 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 MEIS3P2A8K0S8 358 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 HNRNPDLO14979 420 aaKnown RBP12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 CLDN3O15551 220 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 F13A1P00488 732 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 URODP06132 367 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 DNAJB1P25685 340 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 IRS1P35568 1242 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 LIG4P49917 911 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 CACNB1Q02641 598 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 CLUL1Q15846 466 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 ZNF280BQ86YH2 543 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 FAM178BQ8IXR5 827 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 EFHBQ8N7U6 833 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 ZFP42Q96MM3 310 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 CLIC6Q96NY7 704 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 REEP2Q9BRK0 252 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 COL25A1Q9BXS0 654 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 PANK2Q9BZ23 570 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 CCDC113Q9H0I3 377 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 MRPL17Q9NRX2 175 aaKnown RBP12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 DNAJB4Q9UDY4 337 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 DPP7Q9UHL4 492 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 CD207Q9UJ71 328 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 FBXO2Q9UK22 296 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 TNFSF13BQ9Y275 285 aa12.29□□□□□ -0.44
ARHGEF39-204ENST00000488918 ARID2Q68CP9 1835 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 NPHP3-ACAD11A0A0J9YXS1 232 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 NRP1O14786 923 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 PER2O15055 1255 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 TRAK2O60296 914 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 PPP6R2O75170 966 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 RECQL4O94761 1208 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 YEATS4O95619 227 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 IDEP14735 1019 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 SLC11A1P49279 550 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 NASPP49321 788 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 ERVFC1P60507 584 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 OSTNP61366 133 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 PTPAQ15257 358 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 KYAT1Q16773 422 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 LLGL2Q6P1M3 1020 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 MPZL3Q6UWV2 235 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 STXBP4Q6ZWJ1 553 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 DYMQ7RTS9 669 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 HAUS6Q7Z4H7 955 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 PPFIBP1Q86W92 1011 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 PDILTQ8N807 584 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 CASP10Q92851 521 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 ACAP3Q96P50 834 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 POP1Q99575 1024 aaKnown RBP12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 ACO2Q99798 780 aaKnown RBP12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 PYM1Q9BRP8 204 aaKnown RBP12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 NTPCRQ9BSD7 190 aaKnown RBP12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 SLC38A7Q9NVC3 462 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 ZMYM2Q9UBW7 1377 aa12.28□□□□□ -0.44
ARHGEF39-204ENST00000488918 TNFRSF10AO00220 468 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 C2CD2LO14523 706 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 CUTAO60888 179 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 TOM1L1O75674 476 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 DDHD2O94830 711 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 MCF2P10911 925 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 GAP43P17677 238 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 KLRC2P26717 231 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 CREMQ03060 361 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 GRIN1Q05586 938 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 ELAVL2Q12926 359 aaKnown RBP12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 ADAM15Q13444 863 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 NT5DC1Q5TFE4 455 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms