RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 SMRP1Q8NCR6 262 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 CALML4Q96GE6 196 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 ZFP42Q96MM3 310 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 NTPCRQ9BSD7 190 aaKnown RBP19.26■□□□□ 0.67
ATG3-205ENST00000488910 KIFC3Q9BVG8 833 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 ZBP1Q9H171 429 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 TMEM134Q9H6X4 195 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 MIOSQ9NXC5 875 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 TTLL13PA6NNM8 815 aa19.25■□□□□ 0.67
ATG3-205ENST00000488910 PLA2G4BP0C869 781 aa19.25■□□□□ 0.67
ATG3-205ENST00000488910 LIG1P18858 919 aa19.25■□□□□ 0.67
ATG3-205ENST00000488910 SCNN1GP51170 649 aa19.25■□□□□ 0.67
ATG3-205ENST00000488910 SLC12A3P55017 1021 aa19.25■□□□□ 0.67
ATG3-205ENST00000488910 DCAF4L1Q3SXM0 396 aa19.25■□□□□ 0.67
ATG3-205ENST00000488910 ADHFE1Q8IWW8 467 aa19.25■□□□□ 0.67
ATG3-205ENST00000488910 TMEM87AQ8NBN3 555 aa19.25■□□□□ 0.67
ATG3-205ENST00000488910 GSTCDQ8NEC7 633 aa19.25■□□□□ 0.67
ATG3-205ENST00000488910 BCL7CQ8WUZ0 217 aaPredicted RBP19.25■□□□□ 0.67
ATG3-205ENST00000488910 PLIN2Q99541 437 aa19.25■□□□□ 0.67
ATG3-205ENST00000488910 BARX2Q9UMQ3 279 aaPredicted RBP19.25■□□□□ 0.67
ATG3-205ENST00000488910 TDRD15B5MCY1 1934 aaKnown RBP19.24■□□□□ 0.67
ATG3-205ENST00000488910 SSBP05455 408 aaKnown RBP eCLIP19.24■□□□□ 0.67
ATG3-205ENST00000488910 OR1G1P47890 313 aa19.24■□□□□ 0.67
ATG3-205ENST00000488910 GRIK3Q13003 919 aa19.24■□□□□ 0.67
ATG3-205ENST00000488910 RESTQ13127 1097 aa19.24■□□□□ 0.67
ATG3-205ENST00000488910 MAPK7Q13164 816 aa19.24■□□□□ 0.67
ATG3-205ENST00000488910 NT5DC1Q5TFE4 455 aa19.24■□□□□ 0.67
ATG3-205ENST00000488910 ATF7IP2Q5U623 682 aa19.24■□□□□ 0.67
ATG3-205ENST00000488910 VN1R2Q8NFZ6 395 aa19.24■□□□□ 0.67
ATG3-205ENST00000488910 ZSCAN16Q9H4T2 348 aaPredicted RBP19.24■□□□□ 0.67
ATG3-205ENST00000488910 KMT5AQ9NQR1 393 aa19.24■□□□□ 0.67
ATG3-205ENST00000488910 ARHGAP28Q9P2N2 729 aa19.24■□□□□ 0.67
ATG3-205ENST00000488910 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.23■□□□□ 0.67
ATG3-205ENST00000488910 CLASP2O75122 1294 aaKnown RBP19.23■□□□□ 0.67
ATG3-205ENST00000488910 HOXB8P17481 243 aaPredicted RBP19.23■□□□□ 0.67
ATG3-205ENST00000488910 CA8P35219 290 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 SMTNP53814 917 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 ZP2Q05996 745 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 SPIRE2Q8WWL2 714 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 CASP10Q92851 521 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 RPS6KC1Q96S38 1066 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 POP1Q99575 1024 aaKnown RBP19.23■□□□□ 0.67
ATG3-205ENST00000488910 COLEC11Q9BWP8 271 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 VN1R3Q9BXE9 311 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 CD320Q9NPF0 282 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 KLK14Q9P0G3 267 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 TNFSF13BQ9Y275 285 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 SSX2IPQ9Y2D8 614 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 CLIC4Q9Y696 253 aa19.23■□□□□ 0.67
ATG3-205ENST00000488910 C19orf67A6NJJ6 358 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 SFI1A8K8P3 1242 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 STX6O43752 255 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 EDN1P05305 212 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 PLS3P13797 630 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 SSTR3P32745 418 aaPredicted RBP19.22■□□□□ 0.67
ATG3-205ENST00000488910 RBM10P98175 930 aaKnown RBP19.22■□□□□ 0.67
ATG3-205ENST00000488910 PTPAQ15257 358 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 EEF1DP3Q658K8 133 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 ANKRD54Q6NXT1 300 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 ACO2Q99798 780 aaKnown RBP19.22■□□□□ 0.67
ATG3-205ENST00000488910 MRPL4Q9BYD3 311 aaKnown RBP19.22■□□□□ 0.67
ATG3-205ENST00000488910 CCSER1Q9C0I3 900 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 FOXD4L1Q9NU39 408 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 SNTG2Q9NY99 539 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 MTMR6Q9Y217 621 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 USP20Q9Y2K6 914 aa19.22■□□□□ 0.67
ATG3-205ENST00000488910 PRG3Q9Y2Y8 225 aaPredicted RBP19.22■□□□□ 0.67
ATG3-205ENST00000488910 C5orf42Q9H799 3197 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 SOD2P04179 222 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 PDIA4P13667 645 aaKnown RBP19.21■□□□□ 0.67
ATG3-205ENST00000488910 GRIN1Q05586 938 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 TPRNQ4KMQ1 711 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 ARSHQ5FYA8 562 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 LLGL2Q6P1M3 1020 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 PPFIBP1Q86W92 1011 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 AUTS2Q8WXX7 1259 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 S1PR5Q9H228 398 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 MRPL17Q9NRX2 175 aaKnown RBP19.21■□□□□ 0.67
ATG3-205ENST00000488910 MARCH5Q9NX47 278 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 LARSQ9P2J5 1176 aaKnown RBP19.21■□□□□ 0.67
ATG3-205ENST00000488910 SRPRBQ9Y5M8 271 aaKnown RBP19.21■□□□□ 0.67
ATG3-205ENST00000488910 HCFC2Q9Y5Z7 792 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 MORC2Q9Y6X9 1032 aaPredicted RBP19.21■□□□□ 0.67
ATG3-205ENST00000488910 MYH11P35749 1972 aa19.21■□□□□ 0.67
ATG3-205ENST00000488910 H0YCG3 227 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 SLC16A4O15374 487 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 LILRB3O75022 631 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 RECQL4O94761 1208 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 EFEMP2O95967 443 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 THP07101 528 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 RAD51AP2Q09MP3 1159 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 TUSC3Q13454 348 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 PTPN14Q15678 1187 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 SYCE2Q6PIF2 218 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 TAS1R3Q7RTX0 852 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 HSCBQ8IWL3 235 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 RNF168Q8IYW5 571 aaPredicted RBP19.2■□□□□ 0.66
ATG3-205ENST00000488910 RASSF8Q8NHQ8 419 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 SUSD6Q92537 303 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 HERC2P3Q9BVR0 1158 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms