RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TRIM29Q14134 588 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 SLC27A1Q6PCB7 646 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 TAS1R1Q7RTX1 841 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 CMASQ8NFW8 434 aaPredicted RBP20.45■□□□□ 0.86
HDAC6-231ENST00000488905 PIGOQ8TEQ8 1089 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 MTMR9Q96QG7 549 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 MIOSQ9NXC5 875 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 TRIP11Q15643 1979 aa20.45■□□□□ 0.86
HDAC6-231ENST00000488905 GALR2O43603 387 aaPredicted RBP20.44■□□□□ 0.86
HDAC6-231ENST00000488905 NR1I2O75469 434 aa20.44■□□□□ 0.86
HDAC6-231ENST00000488905 GLUD1P00367 558 aa20.44■□□□□ 0.86
HDAC6-231ENST00000488905 ELMSAN1Q6PJG2 1045 aa20.44■□□□□ 0.86
HDAC6-231ENST00000488905 TMEM105Q8N8V8 129 aa20.44■□□□□ 0.86
HDAC6-231ENST00000488905 ATOH1Q92858 354 aaPredicted RBP20.44■□□□□ 0.86
HDAC6-231ENST00000488905 DPP7Q9UHL4 492 aa20.44■□□□□ 0.86
HDAC6-231ENST00000488905 DOCK6Q96HP0 2047 aa20.44■□□□□ 0.86
HDAC6-231ENST00000488905 VWA8A3KMH1 1905 aa20.43■□□□□ 0.86
HDAC6-231ENST00000488905 NPTXRO95502 500 aa20.43■□□□□ 0.86
HDAC6-231ENST00000488905 AKAP5P24588 427 aa20.43■□□□□ 0.86
HDAC6-231ENST00000488905 DSG1Q02413 1049 aa20.43■□□□□ 0.86
HDAC6-231ENST00000488905 GRIK3Q13003 919 aa20.43■□□□□ 0.86
HDAC6-231ENST00000488905 KIAA0319Q5VV43 1072 aa20.43■□□□□ 0.86
HDAC6-231ENST00000488905 CDR2LQ86X02 465 aaPredicted RBP20.43■□□□□ 0.86
HDAC6-231ENST00000488905 TMEM60Q9H2L4 133 aa20.43■□□□□ 0.86
HDAC6-231ENST00000488905 MFSD1Q9H3U5 465 aa20.43■□□□□ 0.86
HDAC6-231ENST00000488905 RXFP1Q9HBX9 757 aa20.43■□□□□ 0.86
HDAC6-231ENST00000488905 LRRIQ4A6NIV6 560 aa20.42■□□□□ 0.86
HDAC6-231ENST00000488905 H0Y858 1186 aa20.42■□□□□ 0.86
HDAC6-231ENST00000488905 ASTLQ6HA08 431 aaPredicted RBP20.42■□□□□ 0.86
HDAC6-231ENST00000488905 FUT10Q6P4F1 479 aa20.42■□□□□ 0.86
HDAC6-231ENST00000488905 GSTCDQ8NEC7 633 aa20.42■□□□□ 0.86
HDAC6-231ENST00000488905 COLEC11Q9BWP8 271 aa20.42■□□□□ 0.86
HDAC6-231ENST00000488905 RHOBTB2Q9BYZ6 727 aa20.42■□□□□ 0.86
HDAC6-231ENST00000488905 GPRC5CQ9NQ84 441 aa20.42■□□□□ 0.86
HDAC6-231ENST00000488905 CHST7Q9NS84 486 aa20.42■□□□□ 0.86
HDAC6-231ENST00000488905 DUSP12Q9UNI6 340 aa20.42■□□□□ 0.86
HDAC6-231ENST00000488905 RIF1Q5UIP0 2472 aaKnown RBP20.42■□□□□ 0.86
HDAC6-231ENST00000488905 A0A087WWV3 80 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 CCDC195A0A1B0GUA6 201 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 A0A1B0GUA9 196 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 SPATA31C1P0DKV0 1188 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 XRCC6P12956 609 aaKnown RBP eCLIP20.41■□□□□ 0.86
HDAC6-231ENST00000488905 NEK4P51957 841 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 ST3GAL1Q11201 340 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 TDGQ13569 410 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 CDCA2Q69YH5 1023 aaPredicted RBP20.41■□□□□ 0.86
HDAC6-231ENST00000488905 CYP26C1Q6V0L0 522 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 PPP4R3CPQ6ZMV5 832 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 MCPH1Q8NEM0 835 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 B3GALT6Q96L58 329 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 PRIMPOLQ96LW4 560 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 TUFT1Q9NNX1 390 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 PRMT7Q9NVM4 692 aaPredicted RBP20.41■□□□□ 0.86
HDAC6-231ENST00000488905 ADAM28Q9UKQ2 775 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 CLUHO75153 1309 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 FAM186AA6NE01 2351 aa20.41■□□□□ 0.86
HDAC6-231ENST00000488905 ST18O60284 1047 aa20.4■□□□□ 0.86
HDAC6-231ENST00000488905 GFRA3O60609 400 aa20.4■□□□□ 0.86
HDAC6-231ENST00000488905 N4BP1O75113 896 aaKnown RBP20.4■□□□□ 0.86
HDAC6-231ENST00000488905 RFPL2O75678 378 aa20.4■□□□□ 0.86
HDAC6-231ENST00000488905 MCM7P33993 719 aa20.4■□□□□ 0.86
HDAC6-231ENST00000488905 CWF19L1Q69YN2 538 aaKnown RBP20.4■□□□□ 0.86
HDAC6-231ENST00000488905 MAEAQ7L5Y9 396 aa20.4■□□□□ 0.86
HDAC6-231ENST00000488905 STAMQ92783 540 aa20.4■□□□□ 0.86
HDAC6-231ENST00000488905 GPR62Q9BZJ7 368 aa20.4■□□□□ 0.86
HDAC6-231ENST00000488905 KCNK12Q9HB15 430 aa20.4■□□□□ 0.86
HDAC6-231ENST00000488905 WDR6Q9NNW5 1121 aaKnown RBP20.4■□□□□ 0.86
HDAC6-231ENST00000488905 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.4■□□□□ 0.86
HDAC6-231ENST00000488905 KLK14Q9P0G3 267 aa20.4■□□□□ 0.86
HDAC6-231ENST00000488905 PARP2Q9UGN5 583 aa20.4■□□□□ 0.86
HDAC6-231ENST00000488905 MED24O75448 989 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 MYBP10242 640 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 ATP2B1P20020 1258 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 CLCN5P51795 746 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 USP41Q3LFD5 358 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 CATSPER3Q86XQ3 398 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 ZBTB8OSQ8IWT0 167 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 GPR65Q8IYL9 337 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 HDAC7Q8WUI4 952 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 SMG7Q92540 1137 aaKnown RBP20.39■□□□□ 0.85
HDAC6-231ENST00000488905 FNIP2Q9P278 1114 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 IGSF9Q9P2J2 1179 aa20.39■□□□□ 0.85
HDAC6-231ENST00000488905 PTPRZ1P23471 2315 aaPredicted RBP20.39■□□□□ 0.85
HDAC6-231ENST00000488905 SF3B1O75533 1304 aaKnown RBP eCLIP20.38■□□□□ 0.85
HDAC6-231ENST00000488905 MYH15Q9Y2K3 1946 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 TGM5O43548 720 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 PAPLNO95428 1278 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 C1RP00736 705 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 GBP2P32456 591 aaPredicted RBP20.38■□□□□ 0.85
HDAC6-231ENST00000488905 GUCY1B3Q02153 619 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 CREMQ03060 361 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 SAFBQ15424 915 aaKnown RBP eCLIP20.38■□□□□ 0.85
HDAC6-231ENST00000488905 FAM187BQ17R55 369 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 POTEGQ6S5H5 508 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 FLCNQ8NFG4 579 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 RABGGTAQ92696 567 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 ZNF707Q96C28 371 aaPredicted RBP20.38■□□□□ 0.85
HDAC6-231ENST00000488905 POLR3CQ9BUI4 534 aaPredicted RBP20.38■□□□□ 0.85
HDAC6-231ENST00000488905 C2orf40Q9H1Z8 148 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 FZD8Q9H461 694 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms